Gene Pfl01_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0016 
Symbolfmt 
ID3717584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp18485 
End bp19444 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content65% 
IMG OID 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_345749 
Protein GI77456244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000109798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC CACTGCGCAT CGTTTTTGCC GGCACCCCGG AATTCGCCGC CGAACACCTC 
AAGGCCCTGC TGGACAGCCC TTACGAGATC GTTGCGGTCT ACACCCAACC GGATCGCCCG
GCCGGGCGTG GGCAAAAACT GATGCCGAGC CCGGTCAAAC AGCTCGCCCT GGAAAACAAT
ATTCAGGTGT TGCAGCCGCC GACCCTGCGC AACGCCGACG CTCAGGCCGA GCTCGCTGCG
CTCAAGCCGG ATTTGATGGT GGTGGTTGCC TACGGCCTGA TTCTGCCGCA AGCGGTGCTG
GATATTCCGC GCCTGGGTTG CATCAACAGT CACGCCTCGC TGCTGCCGCG CTGGCGCGGT
GCGGCGCCGA TCCAGCGCGC CGTGGAAGCG GGCGACGCCG AGAGCGGCGT GACCGTGATG
CGCATGGAAG CCGGTCTCGA TACCGGGCCG ATGCTGCTTA AAGTCGTGAC CCCGATCAGC
GCCGAAGACA CCGGCGGCAG CCTCCACGAT CGCTTGGCCG AAATGGGCCC GCCCGCCGTG
GTTCAAGCGA TTGCCGGTCT GGCCGCCGGC ACCCTGGAAG GCGAAGTGCA GAACGACGAG
CTCGCCACCT ACGCGCACAA ACTGAACAAA GATGAAGCAC GCATCGACTG GAGCCGCCCG
GCCGTTGAGC TGGAACGTCT GGTCCGTGCC TTCAATCCAT GGCCGATCAC CCACAGCACG
CTCAACGGCG AAGCGCTGAA AGTGTTGGCG GCGACACTGG CCGAAGGCAA AGGCGCACCG
GGCACCATCC TCGGCGCCAG CAAGGACGGT CTGATCGTCG CCTGTGGCGA ACAGGCGCTG
TGCCTGACCC GTCTGCAATT GCCCGGCGGC AAGGCGCTGA ACTTCAGCGA TCTGTTCAAC
AGCCGTCGTG AGAAATTCGC CACCGGCATC GTGCTGGGTG CAGCGGTGGA CGCTCAATGA
 
Protein sequence
MTEPLRIVFA GTPEFAAEHL KALLDSPYEI VAVYTQPDRP AGRGQKLMPS PVKQLALENN 
IQVLQPPTLR NADAQAELAA LKPDLMVVVA YGLILPQAVL DIPRLGCINS HASLLPRWRG
AAPIQRAVEA GDAESGVTVM RMEAGLDTGP MLLKVVTPIS AEDTGGSLHD RLAEMGPPAV
VQAIAGLAAG TLEGEVQNDE LATYAHKLNK DEARIDWSRP AVELERLVRA FNPWPITHST
LNGEALKVLA ATLAEGKGAP GTILGASKDG LIVACGEQAL CLTRLQLPGG KALNFSDLFN
SRREKFATGI VLGAAVDAQ