Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0016 |
Symbol | fmt |
ID | 3717584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 18485 |
End bp | 19444 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_345749 |
Protein GI | 77456244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000109798 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC CACTGCGCAT CGTTTTTGCC GGCACCCCGG AATTCGCCGC CGAACACCTC AAGGCCCTGC TGGACAGCCC TTACGAGATC GTTGCGGTCT ACACCCAACC GGATCGCCCG GCCGGGCGTG GGCAAAAACT GATGCCGAGC CCGGTCAAAC AGCTCGCCCT GGAAAACAAT ATTCAGGTGT TGCAGCCGCC GACCCTGCGC AACGCCGACG CTCAGGCCGA GCTCGCTGCG CTCAAGCCGG ATTTGATGGT GGTGGTTGCC TACGGCCTGA TTCTGCCGCA AGCGGTGCTG GATATTCCGC GCCTGGGTTG CATCAACAGT CACGCCTCGC TGCTGCCGCG CTGGCGCGGT GCGGCGCCGA TCCAGCGCGC CGTGGAAGCG GGCGACGCCG AGAGCGGCGT GACCGTGATG CGCATGGAAG CCGGTCTCGA TACCGGGCCG ATGCTGCTTA AAGTCGTGAC CCCGATCAGC GCCGAAGACA CCGGCGGCAG CCTCCACGAT CGCTTGGCCG AAATGGGCCC GCCCGCCGTG GTTCAAGCGA TTGCCGGTCT GGCCGCCGGC ACCCTGGAAG GCGAAGTGCA GAACGACGAG CTCGCCACCT ACGCGCACAA ACTGAACAAA GATGAAGCAC GCATCGACTG GAGCCGCCCG GCCGTTGAGC TGGAACGTCT GGTCCGTGCC TTCAATCCAT GGCCGATCAC CCACAGCACG CTCAACGGCG AAGCGCTGAA AGTGTTGGCG GCGACACTGG CCGAAGGCAA AGGCGCACCG GGCACCATCC TCGGCGCCAG CAAGGACGGT CTGATCGTCG CCTGTGGCGA ACAGGCGCTG TGCCTGACCC GTCTGCAATT GCCCGGCGGC AAGGCGCTGA ACTTCAGCGA TCTGTTCAAC AGCCGTCGTG AGAAATTCGC CACCGGCATC GTGCTGGGTG CAGCGGTGGA CGCTCAATGA
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Protein sequence | MTEPLRIVFA GTPEFAAEHL KALLDSPYEI VAVYTQPDRP AGRGQKLMPS PVKQLALENN IQVLQPPTLR NADAQAELAA LKPDLMVVVA YGLILPQAVL DIPRLGCINS HASLLPRWRG AAPIQRAVEA GDAESGVTVM RMEAGLDTGP MLLKVVTPIS AEDTGGSLHD RLAEMGPPAV VQAIAGLAAG TLEGEVQNDE LATYAHKLNK DEARIDWSRP AVELERLVRA FNPWPITHST LNGEALKVLA ATLAEGKGAP GTILGASKDG LIVACGEQAL CLTRLQLPGG KALNFSDLFN SRREKFATGI VLGAAVDAQ
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