| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3086 |
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| Symbol | |
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| ID | 3705664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3477905 |
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| End bp | 3479281 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637739560 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_345057 |
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| Protein GI | 77166532 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.924716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACATT ACCCGTCAGA TCGAACAAGA AGGCTAAGCG ATACCATCGC GGCGATAGCT
ACGCCACCAG GCCAAGGTAG TGTGGGTATC GTTCGCGTTT CTGGTCCGTT TTGCCGCCAA
ATCGCTGAGC AGGTAACGGG GCGGGTACCT CCACCCCGTT ACGCTACATT TTGCCATTTT
CGCAATCGTT ATGGGGAAAT CCTTGATCAG GGGCTGATCC TCTATTTTCC TGGTCCTCAC
TCTTTTACTG GCGAGGATGT GCTAGAGTTA CAAGGACATG GGGGGCCTGC CATAATGGAC
TGGCTTTTGA GCAGTGTCCT CCAGCTAGGT GTCCGATTAG CGCGCCCTGG TGAATTTAGC
GAGCGAGCCT TTCTTAATAA TAAAATTGAT TTAGCTCAGG CTGAAGCTAT CGCCGATCTT
ATTGAAAGCG CTTCGGAGCA GGCCGCCCGT AGTGCTTTAC GTTCTCTCCA TGGTGAATTT
TCAGCACAAA TCCAGACTTT GCGAGAGCAG CTAACTGAAT TACGCTGCGT GGTAGAGGCA
AATATTGATT TTAGTGATGA AGATATTGAT TTTATTGAAC GAGGAATGGT GGCGGAACGT
TTAAAAGAGA TTCAATCCAC ATTACAAAGC ATTCACCGCA GCGCCCGGCA AGGGGCTTTG
CTGCGGGAAG GGGTCAGGGT GGTGCTAGCA GGCCGGCCTA ATGTGGGGAA ATCTAGTTTG
CATAATCGTC TAGCAGGATT TGAAGCAGCT ATCGTTACCG ATGTCCCAGG AACTACCCGA
GATTTGCTGC GCGAGAATAT AACTATAGAT GGTCTGCCTA TACACCTTTC TGATACTGCG
GGCCTTCACA ATTCTAAAGA TACCATCGAA CAGGAAGGAA TGCGCCGTAC TCGTGAAGAG
CTTATTCACG CTGATCATGT GTTGCTCGTT GCTGATGATC AAAGCGGCTT AACGGAAGCG
GAACAAGCGA TTCTTGATGA ATTACCCGAT GATGTAACCT ATACGCTTAT TTTTAATAAG
ATTGATCTTA GCGGCGCTCC TGCTGGGCGC TGGGAGGAGC TTCAAGGAAT AGCGCTGCGG
CTTTCCGCAT TGACGGGTGC TGGCATGGAT TTGCTCTGCC AACGGCTCAA GGAGTGCGCA
GGTTTTGACA GGGAAAGCGA GGGATGTTTT TCAGCTCGCC GGCGCCATTT GGAAGCTCTA
CAGCGAGCCG GCGCTGCTGT GGTGGTCGCT AGGAAAATTC TCGGGGACAA GGGCGCCGAG
GAAATACTTG CTGAAGAGCT GCGCCAGGCC CAAAATGCCC TAGCAGAGAT TACCGGTGAA
TACCGCTCGG ATGATTTACT AGGTGAGATA TTCTCAACTT TCTGTATCGG AAAATAG
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| Protein sequence | MVHYPSDRTR RLSDTIAAIA TPPGQGSVGI VRVSGPFCRQ IAEQVTGRVP PPRYATFCHF
RNRYGEILDQ GLILYFPGPH SFTGEDVLEL QGHGGPAIMD WLLSSVLQLG VRLARPGEFS
ERAFLNNKID LAQAEAIADL IESASEQAAR SALRSLHGEF SAQIQTLREQ LTELRCVVEA
NIDFSDEDID FIERGMVAER LKEIQSTLQS IHRSARQGAL LREGVRVVLA GRPNVGKSSL
HNRLAGFEAA IVTDVPGTTR DLLRENITID GLPIHLSDTA GLHNSKDTIE QEGMRRTREE
LIHADHVLLV ADDQSGLTEA EQAILDELPD DVTYTLIFNK IDLSGAPAGR WEELQGIALR
LSALTGAGMD LLCQRLKECA GFDRESEGCF SARRRHLEAL QRAGAAVVVA RKILGDKGAE
EILAEELRQA QNALAEITGE YRSDDLLGEI FSTFCIGK
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