Gene Noc_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3079 
Symbol 
ID3705657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3471807 
End bp3472091 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content48% 
IMG OID637739553 
ProductATP synthase F0, C subunit 
Protein accessionYP_345050 
Protein GI77166525 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0268592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCTG AACTGCTTGT GTCTATCTAT GCCTCTACCG CTGTTAGTGT GGGGATCATT 
CTTGCCGCTG CTGGTCTTGG TTCTGCTCTG GGGTGGGGAC TTATTTGTTC CAAATATCTT
GAAGGTATTG CCCGGCAGCC TGAGATGCGT CCGCAATTAA TGGGACAGAT GCTGTTTACA
GGCGGTTTGA TGGAAGCATT TCCTATGATT GTTTTGGGCA TGTCCATGTG GTTTATATTT
GCTAATCCCT TTACTGGTGC TGCCCTGGCT GCAATCGGCA GCTAA
 
Protein sequence
MDPELLVSIY ASTAVSVGII LAAAGLGSAL GWGLICSKYL EGIARQPEMR PQLMGQMLFT 
GGLMEAFPMI VLGMSMWFIF ANPFTGAALA AIGS