Gene Noc_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3048 
Symbol 
ID3704347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3443570 
End bp3444046 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content48% 
IMG OID637739522 
Producthypothetical protein 
Protein accessionYP_345019 
Protein GI77166494 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000244651 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTGCA AGCGGTATGG ACCTTCGGAA GATACGCTTC GGTTTATCCT TCGACCCAAT 
AGCTCTTTGA GCTGGAGAGG AATGAAGGCA GTTTTTTTTG CTATGACACT AGTTCTCGTC
ATAATAGCCG GAGGGTTTAG TCTTTTAGGT CTATGGTTGA TTTTTCCGTT TGCTGGGCTA
GAACTGCTCA TTTTGGGAAT CGCATTTTAT CTGTCTGCGC GCCGTGCTCA ACACTGTGAA
ATCATTACCA TCGGTCAGGA GGAGATTGAA ATTTTTCGTG GCCGCGAAAC GACGGGTGAA
ACATGGAAGT TTCATCGCTA TTGGGCTCGG GTTAGAATTG AGCTTCCACC CTATGCGTGG
CATATGAGCC GCTTAATAAT AGGTTCTCAC GGGCACGAAG TAGAAATTGG CGTTTTCCTG
AGCGAGGAGG AGCGTCTCCG TTTAGCCAAG GAGTTGCAGG CGGTTTGTGG CGCCTAA
 
Protein sequence
MVCKRYGPSE DTLRFILRPN SSLSWRGMKA VFFAMTLVLV IIAGGFSLLG LWLIFPFAGL 
ELLILGIAFY LSARRAQHCE IITIGQEEIE IFRGRETTGE TWKFHRYWAR VRIELPPYAW
HMSRLIIGSH GHEVEIGVFL SEEERLRLAK ELQAVCGA