Gene Noc_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3023 
Symbol 
ID3705770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3420694 
End bp3421185 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content55% 
IMG OID637739497 
Productsingle-strand binding protein 
Protein accessionYP_344995 
Protein GI77166470 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.208974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA GGGGCGTTAA CAAAGTCATC CTGGTAGGTA ACCTGGGGCG CGATCCGGAA 
GTTCGTTATA CCGCCAGCGG CGGAGCCATT GCCAATATCA CCCTAGCGAC TTCAGAAACC
TGGAAAGATA AAACCACCGG CGAGCAGCAA GAGCGTACCG AATGGCACCG GGTGGTATTC
TTCGGTCGCC TGGGGGAAAT TGCCGGGGAG TATCTAAAAA AAGGCGCCAA AATTTATGTG
GAAGGCCGCC TCCAAACTCG TAAGTGGCAG GGCCAAGACG GTCAGGACCG TTATACTACC
GAGATTGTCG CCAGCGAAAT GCAAATGCTG GATCGGGCCA CAGGTGGTAG CGCCCCCTAT
AACGAGGATA ATAGCATGCC AAGAGGAGGA ACCGCGGGAC ACCCTCCTCA CTCCCCATCC
AGCCCTCAAC CCCGGCCTTC AGCTCCCCCC TCCTCTAGCA ATGACGATTT CGAGGATGAT
ATTCCCTTTT GA
 
Protein sequence
MASRGVNKVI LVGNLGRDPE VRYTASGGAI ANITLATSET WKDKTTGEQQ ERTEWHRVVF 
FGRLGEIAGE YLKKGAKIYV EGRLQTRKWQ GQDGQDRYTT EIVASEMQML DRATGGSAPY
NEDNSMPRGG TAGHPPHSPS SPQPRPSAPP SSSNDDFEDD IPF