Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3023 |
Symbol | |
ID | 3705770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3420694 |
End bp | 3421185 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637739497 |
Product | single-strand binding protein |
Protein accession | YP_344995 |
Protein GI | 77166470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.208974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCAA GGGGCGTTAA CAAAGTCATC CTGGTAGGTA ACCTGGGGCG CGATCCGGAA GTTCGTTATA CCGCCAGCGG CGGAGCCATT GCCAATATCA CCCTAGCGAC TTCAGAAACC TGGAAAGATA AAACCACCGG CGAGCAGCAA GAGCGTACCG AATGGCACCG GGTGGTATTC TTCGGTCGCC TGGGGGAAAT TGCCGGGGAG TATCTAAAAA AAGGCGCCAA AATTTATGTG GAAGGCCGCC TCCAAACTCG TAAGTGGCAG GGCCAAGACG GTCAGGACCG TTATACTACC GAGATTGTCG CCAGCGAAAT GCAAATGCTG GATCGGGCCA CAGGTGGTAG CGCCCCCTAT AACGAGGATA ATAGCATGCC AAGAGGAGGA ACCGCGGGAC ACCCTCCTCA CTCCCCATCC AGCCCTCAAC CCCGGCCTTC AGCTCCCCCC TCCTCTAGCA ATGACGATTT CGAGGATGAT ATTCCCTTTT GA
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Protein sequence | MASRGVNKVI LVGNLGRDPE VRYTASGGAI ANITLATSET WKDKTTGEQQ ERTEWHRVVF FGRLGEIAGE YLKKGAKIYV EGRLQTRKWQ GQDGQDRYTT EIVASEMQML DRATGGSAPY NEDNSMPRGG TAGHPPHSPS SPQPRPSAPP SSSNDDFEDD IPF
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