| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3016 |
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| Symbol | |
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| ID | 3705763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3409479 |
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| End bp | 3410690 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637739490 |
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| Product | Fmu, rRNA SAM-dependent methyltransferase |
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| Protein accession | YP_344988 |
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| Protein GI | 77166463 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCATC TACCGGCGCG AGATCAAGCC TTTACCCAAA CCTTATGCTA TGGAGTTTTA
CGATGGCTCC CCCGGCTTGA CTATCTGGCC CAGAAGATTT TACATAAGCC GTTACGAGCA
CGCGACAGGG ATCTTTATGC CTTGCTACTT TTGGGGCTAT ACCAGCTAAC GGAGCTAGGT
ATTCCCTCCC ATGCGGCTTT GTCCGAAACT GTCAACGCCG CCGAAAGCCT GGGTAAGCCA
TGGGCTAAAA AAATGCTCAA CGCAACCCTC CGGGCCTACT TACGCAATGA AACCGCCCTA
CAAACTCAGG TGACCGCCCA TGAAACGGCC CACACCGCTC ACCCTCAGTG GCTCTTGGAC
GCTATCCGCA ATTCCTGGCC AGATCATTGG CCTCAAATTA TTACGGCCAA CAATAGCCAC
CCCCCTCTCA GTCTGCGTAT TAACCGTCTC CAAAACAATC GGAAGAACTA TCTGCAGGAA
CTGAAACGCA ATGATATCAA AGCCTGGCCC ATCCCCCATA CGGAAAGTGG AGTCATACTA
GAGCAGCCCT GCCAAGTCGC AACCTTGCCA GGTTTTCTTA AGGGCCAAGT TTCCGTCCAG
GATGGTGCCG GACAGCGAGC TGCTCCTTTA TTGGCCCTGA CCCCAGGGCA ACGCGTATTG
GATGCTTGCG CAGCTCCTGG GGGCAAAACC AGCCATATTC TGGAGCTTGA ACCTCAATTG
GAGACCCTCA TTGCTTTGGA TTTAGATGCG ACCCGCTTAG AGAGACTCAA TAGCAATCTT
AAGCGATTGC AACTGAAGGC TGAGGTGATC CAAGGCAATG CGCTGCAACC TGACACTTGG
TGGGATGGAA TCCCCTTTGA TCGTATTTTG CTAGATGCTC CCTGCTCGGG TAGCGGAGTC
ATCCGCCGCC ACCCCGACAT TAAAGCACTA AGACGAGAAA GTGATATTCT TCCCTTGGCA
ACCCTGCAAA AGCGCTTATT ATCGGCTCTA TGGCCGCTGC TCGCGCCAGG AGGCATGCTG
CTTTACTGCA CTTGCTCCAT ATTGCCTATA GAGAACGAAC AGCAGATTCG TGAATTTCTT
CTTACCCACC CCGATGGGCA AGAGCGGCCA TTGGATGTTC CGTGGGGCTT GCTGCAAACA
GCTGGACGGC AACTATTAAC TGGCATGGAA GAATTAGACG GGTTCTATTA TGCCTGCCTG
GAGAAGCGCT GA
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| Protein sequence | MAHLPARDQA FTQTLCYGVL RWLPRLDYLA QKILHKPLRA RDRDLYALLL LGLYQLTELG
IPSHAALSET VNAAESLGKP WAKKMLNATL RAYLRNETAL QTQVTAHETA HTAHPQWLLD
AIRNSWPDHW PQIITANNSH PPLSLRINRL QNNRKNYLQE LKRNDIKAWP IPHTESGVIL
EQPCQVATLP GFLKGQVSVQ DGAGQRAAPL LALTPGQRVL DACAAPGGKT SHILELEPQL
ETLIALDLDA TRLERLNSNL KRLQLKAEVI QGNALQPDTW WDGIPFDRIL LDAPCSGSGV
IRRHPDIKAL RRESDILPLA TLQKRLLSAL WPLLAPGGML LYCTCSILPI ENEQQIREFL
LTHPDGQERP LDVPWGLLQT AGRQLLTGME ELDGFYYACL EKR
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