Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3013 |
Symbol | |
ID | 3705721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3406273 |
End bp | 3407310 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637739487 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_344985 |
Protein GI | 77166460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTA AAAAATTAAT AAGTATCATG TTTTTATACG CTATGACAAG TAGTGTTTGG GGAGAGCCGG TTACCCTTAA TCCAGATGCC CCCCAACGCT ATGAGGTAGT TCGTGACGAT ACCCTGTGGG ATATTGCAGG CCGCTTTTTA CGAGATCCCT GGCGTTGGCC GGATATTTGG CAGGTTAATC AGCAAATTAA TAATCCTCAC TTGATCTACC CTGGCGATAT TATTTTTTTA AGCTACCGTG AAAATGGTGA CCCTGTATTG GAGCTTCAGC GAGGACTTCC TAGTTATAAG ATGTCGCCGG CGGTTCGAAC CAGCAAGCTA GAGAAGGCGA TTCCCACCAT TCCTATTGAT GCTATTCAGC AGTTCTTGTT GCATCCCCGA GTAGTCAGTA AAGAGACTTT GGATAATGCT CCCTATGTAG TAGCGGGAAC TGAAGAGCGT TTGATTTTAG GAGCAGGAGA TGAAATTTAT GTCCGCGGTC TAAGCAAGTC GGCTATAATA AGATATGGGA TTTACCGTGG AGGGGAAGTC TATCGCGATC CAGATCATCC CTCTAAAATT TTAGGTTATG AGGCTCTTTT TATTGCCGAT GCTAATATAC AGCGGTTTGG TGATCCCGCT ATCCTGAGTA TTCAAAACTC TACCCGGGAG ATATTAGTCG GTGATCGTCT CTTGCCAACA AGTGATTTGG AATTTGAGCA GCATTTTTTA CCTCACGCAT CACCGACTCC CGTAGAAGGC AAAATTATCG CTGTGATAGA TGGAGTCTCC CAAATTGGCC AGTATCAGGC TGTGGCGTTG AATTTAGGTG TTGAGGATGG CATGGAAAAA GGGACGGTGC TTGCCGTATA CCAGGCAGGC AGAGTTGTGC GTGATCCTAT CAGCCGTTTA CCGGAGGACA AGGTTCGGTT ACCTGATGAA CGAGCAGGGG TGATCATGGT TTTTCGTGCT TTTAATCATA TCAGCTATGG GTTGATGATG GGGGCGGAGC GGGCCATTCA TGTGTATGAT GTTGTTCGTA ATCCATAA
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Protein sequence | MNLKKLISIM FLYAMTSSVW GEPVTLNPDA PQRYEVVRDD TLWDIAGRFL RDPWRWPDIW QVNQQINNPH LIYPGDIIFL SYRENGDPVL ELQRGLPSYK MSPAVRTSKL EKAIPTIPID AIQQFLLHPR VVSKETLDNA PYVVAGTEER LILGAGDEIY VRGLSKSAII RYGIYRGGEV YRDPDHPSKI LGYEALFIAD ANIQRFGDPA ILSIQNSTRE ILVGDRLLPT SDLEFEQHFL PHASPTPVEG KIIAVIDGVS QIGQYQAVAL NLGVEDGMEK GTVLAVYQAG RVVRDPISRL PEDKVRLPDE RAGVIMVFRA FNHISYGLMM GAERAIHVYD VVRNP
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