Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3012 |
Symbol | |
ID | 3705720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3405155 |
End bp | 3406261 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637739486 |
Product | SMF protein |
Protein accession | YP_344984 |
Protein GI | 77166459 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAC GAGCCTACTG GCTCGCCTTG CACCGCGCTC CTGGTGTCGG CAGTGTCAGT TTTTGCCGCC TCTTGGAGAA ATATGGCTCG CCGACTGCCT TATTTACTTC CCCGGAAAGG CTGGCGGGCC TTAGCGATGG AATCCAGCAT TATTTGCGGC AACCTGATTG GAAAGCGGTA GAGCAGGATC TAAAATGGCT GGAGCAGCCA GACCATTATT TGCTCACTTT GGCCGATCCA GGATATCCGC CGCTACTGCG GGAGATTCCC GACCCGCCTC CCATCTTATT CGTCCATGGT GATCCGTCCT TGCTCTCTTT ACCCCAACTA GCAATTGTGG GCAGCCGCAA TCCTTCCCCT GCGGGGGCTG AAACTGCTGC GCAGTTTGCT ACCTATCTGG CCAATTCAGG TTTAGTTATT AGTAGCGGGC TGGCGCTTGG TATTGATGCT GCCGCCCATG AGGGAGCGCT AGCTGCAAAA GCGGCGACGA TAGCTGTGGC GGGAACCGGG CTAGACAGAG TTTATCCGGC CCGTCATCAT GCCTTGGCTC ATGCCATTGC CGAGAGCGGG GCATTAGTAT CAGAGTTCCC CATTGGAACT CCTCCGTTAC CTCAGAATTT CCCACGCCGT AACCGGCTTA TCAGCGGCCT TAGCTGGGGT ATTCTTGTGG TTGAAGCCGC TTTACAAAGT GGCTCTCTCA TTACAGCCCG CCTAGGCGCG GAACAGGGGC GGGAGATATT TGCTATCCCT GGTTCTATCC ATAACCCCCT CGCCCGGGGC TGTCATCATC TTATCCGAGA GGGTGCCAAG CTAGTGGAAG CCGCCCAAGA TATTTGGGAG GAATTGGGAT CTTTGGCAGG CGCAATACCA AACCTCCAAT GCCAGGAAGC GCCCCAAAAA ATAGAGGCAT CAACCGATGA TCTGGAATAT CAACTTCTAC TGGATTGCTT AGGTTATGAT CCTCTTCCCA TAGATCTCTT AGTTGAGCGT TGTGGATTGA CGGCAGAAGC GGTTTCCTCC ATGCTTTTAA TATTAGAGTT ACAAGGCCGC ATCACGGCAT TGCCTGGAGG ACGCTACCTC CGATGCGGTA AAGAGGGCCA ATCATGA
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Protein sequence | MDERAYWLAL HRAPGVGSVS FCRLLEKYGS PTALFTSPER LAGLSDGIQH YLRQPDWKAV EQDLKWLEQP DHYLLTLADP GYPPLLREIP DPPPILFVHG DPSLLSLPQL AIVGSRNPSP AGAETAAQFA TYLANSGLVI SSGLALGIDA AAHEGALAAK AATIAVAGTG LDRVYPARHH ALAHAIAESG ALVSEFPIGT PPLPQNFPRR NRLISGLSWG ILVVEAALQS GSLITARLGA EQGREIFAIP GSIHNPLARG CHHLIREGAK LVEAAQDIWE ELGSLAGAIP NLQCQEAPQK IEASTDDLEY QLLLDCLGYD PLPIDLLVER CGLTAEAVSS MLLILELQGR ITALPGGRYL RCGKEGQS
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