| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3008 |
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| Symbol | |
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| ID | 3705716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3400559 |
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| End bp | 3401632 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637739482 |
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| Product | uroporphyrinogen decarboxylase HemE |
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| Protein accession | YP_344980 |
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| Protein GI | 77166455 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGT TAAAAAATGA TCGTTTTCTC CGGGCACTGT TGCGGCAGCC GGTGGATCGA
ACCCCGATTT GGATTATGCG CCAGGCGGGG CGTTATCTCC CGGAATATCG GGAAGTGCGT
GCTAAAGCTG GGGATTTTTT GACCTTATGT ACAACGCCAG AGCTAGCTTG CGAAGTGACC
CTGCAACCGC TGCGTCGCTT TGACCTGGAT GCTGCTATTA TTTTTTCCGA TATCCTCACC
ATTCCGCATG CCATGGGGTT GGGATTGTAT TTTTCCAAAG GTGAAGGGCC TCGTTTTGAA
CGGCCGGTAA GAACTAAAAA CCAAGTCTCT GCCCTTGGAG TTCCAGATCC AGAATCGGAT
TTAAGTTATG TCATGGAAGC TCTGCGGTTA ACCCGAAGAG AGCTGGATGG GCGCGTGCCT
CTCATCGGTT TTTCTGGCAG TCCCTGGACC TTAGCGTGCT ATATGGTGGA AGGGGGATCA
AGCAAAGATT TTGCCCTAAT CAAGGGACTA ATGTTTGAGC ATCCTCAAGT AATGCATCAC
CTACTAGAAA TTCTTGCCCA GGCTGTTACA GTCTATCTTA ATGCCCAGAT AGCAGCGGGT
GCCCAGGCCG TGATGCTCTT CGATACTTGG GGTGGAGCGT TAAGTCACCG TGATTATCGG
GACTTCTCTC TCTCTTATAT GGCCAGGATT GTGGAAGGCG TAGTCCGGGA GAATGAAGGC
CGTCAAGTAC CGGTAATTTT ATTCACCAAA GGGGGAGGGC TTTGGTTGGA AACAATGGCT
GGGACGGGCT GTGATGCCTT AGGGGTTGAT TGGACTGTGG ACCTTGCTAA AGCGCGAATG
CAGGTAGGAA AACAAGTCGC CTTGCAAGGG AATATGGACC CTTGCGTGCT TTATGCCTCC
AGCGAACGGG TACGCCAGGA GGCAAGCGAA ATCATTAAAG CTTATGGTGC TGGTAGCGGC
CACGTTTTTA ACCTTGGGCA TGGCATACAT CCTACGGTGA TGCCTGAGAA AGTAGCGGCC
CTTGTGGATG CGGTCCATGA ACTGAGTGTG CCGTATCATA CCTATGAGGA GTGA
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| Protein sequence | MAELKNDRFL RALLRQPVDR TPIWIMRQAG RYLPEYREVR AKAGDFLTLC TTPELACEVT
LQPLRRFDLD AAIIFSDILT IPHAMGLGLY FSKGEGPRFE RPVRTKNQVS ALGVPDPESD
LSYVMEALRL TRRELDGRVP LIGFSGSPWT LACYMVEGGS SKDFALIKGL MFEHPQVMHH
LLEILAQAVT VYLNAQIAAG AQAVMLFDTW GGALSHRDYR DFSLSYMARI VEGVVRENEG
RQVPVILFTK GGGLWLETMA GTGCDALGVD WTVDLAKARM QVGKQVALQG NMDPCVLYAS
SERVRQEASE IIKAYGAGSG HVFNLGHGIH PTVMPEKVAA LVDAVHELSV PYHTYEE
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