| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2992 |
|---|
| Symbol | |
|---|
| ID | 3707471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3384599 |
|---|
| End bp | 3385810 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637739466 |
|---|
| Product | DNA/pantothenate metabolism flavoprotein |
|---|
| Protein accession | YP_344964 |
|---|
| Protein GI | 77166439 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.664782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTC ATCCTTTAAG AGAAAAACGT ATACTGCTAG GGATTAGTGG TAGTATCGCG
GCTTATAAAG GTGCCGATTT GGTCCGCCGG CTGCGAGAGC TGGGGGCTGA GGTGCAAGTT
GTCATGACGG CTACCGCCCA GGGATTTGTC ACTTCTCTCA CCTTTCAAGC ATTAAGCGGG
AAACCCGTTC ATACTGAACT TATGGATCCG GCTCAAGAGG CAGCCATGGG GCATATTGCC
TTAGCCCGCT GGGCGGATTT GCTGTTAGTG GCGCCAGCCT CAGCGGATTG CCTAGCTCGG
TTAGCCCAGG GCCAGGCTAA TGATTTGCTT ACCGCGATAT GCCTAGCGAC GACCGCCCCT
TTGGCAGTAG CCCCCAGCAT GAATCAACAG ATGTGGCAAG CTCTGGCAAC GCAAGAAAAC
ATGGCGGTTT TATGTAGGCG GGGAGTGCAG GTATGGGGAC CCGCTAAAGG AGAGCAAGCC
TGCGGCGAGC AAGGCCCGGG GCGGATGTTA GAGCCCCACG AGCTAATAGG GGCAGCGGCG
AAGCTATTGA CTGAGCCCTT CCTCGCTGGC CGGTCCGTGC TGATAACTGC TGGACCCACC
CGTGAATTCT GGGACCCGGT ACGTTTCCTC AGTAACCGAA GTTCTGGCAA GATGGGATAT
GCGCTGGCTG CCGCAGTGGC TGAGGCCGGA GCCCAGGTAA CACTGATTAG CGGACCCGTG
GCGCTTGACG TGCCTCCGGG GGTACATCGG ATTCAGGTGG AGAGCGCTCA GCAGATGTGC
GATGCTACGC TTGCCCAGGT GGCGGTCATG GATATCCTGA TTGCTTGTGC TGCCGTGGCC
GATTATCGGC CTACTAAACA AGCGGCTCAA AAAATTAAAA AGACGGATCA GGGCCTAACC
CTAGCGCTAG AGCGAACAAC CGATATCCTT GAACAATTGG CTAATTTGGC CGATAAACCC
TTTATCGTTG GATTTGCCGC GGAAACCGAG CGCCTCGAAA TCAATGCATA CCGTAAACTT
AAACTCAAAG GGCTTGATAT GATTGCCGCC AATTGGGTGC AAGGAGGGCA AGGTTTCGAG
GCGGATGACA ATGCCCTAAC AGTCCTATGG CCTGGTGGTA AAGTAGAACT GCCCAGGACG
TCTAAAACTC AGCTAGCCCG AGCGCTTATA AAATTGATTG CGGAATATTA TCATGCCAAA
GGTTCAGCTT AA
|
|---|
| Protein sequence | MIAHPLREKR ILLGISGSIA AYKGADLVRR LRELGAEVQV VMTATAQGFV TSLTFQALSG
KPVHTELMDP AQEAAMGHIA LARWADLLLV APASADCLAR LAQGQANDLL TAICLATTAP
LAVAPSMNQQ MWQALATQEN MAVLCRRGVQ VWGPAKGEQA CGEQGPGRML EPHELIGAAA
KLLTEPFLAG RSVLITAGPT REFWDPVRFL SNRSSGKMGY ALAAAVAEAG AQVTLISGPV
ALDVPPGVHR IQVESAQQMC DATLAQVAVM DILIACAAVA DYRPTKQAAQ KIKKTDQGLT
LALERTTDIL EQLANLADKP FIVGFAAETE RLEINAYRKL KLKGLDMIAA NWVQGGQGFE
ADDNALTVLW PGGKVELPRT SKTQLARALI KLIAEYYHAK GSA
|
|---|
| |