Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2983 |
Symbol | |
ID | 3707462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3375359 |
End bp | 3376849 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637739457 |
Product | aromatic-L-amino-acid decarboxylase |
Protein accession | YP_344955 |
Protein GI | 77166430 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTAAAAA ATACCGATAA TCAGCGGATT AATGATGAAA AACCCATGAA TCCTAGCATA CTGGATGAGA GATTATCCGC TCTAGATCCT TCTCCAGCCC AGCTTCAAAA GCTTCTTGAT GAAGTGGGTC GGCGGCTGGC CGCTTTTGTG GAAACCATAG ATCGGCAACC TGCCCAGGCC GCTGACTACT TTGATCCTCA GGCATCTTGG CTGCGGGAAT CAATACCCGA GACCCCAAGT GCGCCGGGGG AAGTGCTGGA TTTTATCTTC GGACAGGTGA TCCCTTTTGC CTTTAATCCG GCTAGCCCCG GCTATCTTGC TCATGTTCCG GGAGGTGGGT TGTTTTCCTC GGCTCTTGGT GAGCTTATTG CCGCTACGGT CAACCGCTAC ACAGGCGTTT GGGCCGCCGC GCCTGCCGCG GTTGAGATGG AAACTCAGTT GCTTCGGTGG CTGGCGGAAT TGATGGGCCT GCCCCGGGGG TCGCTAGGAC TTTTGACTTC AGGGGCCTCC ATGTCAACCT TAATCGCTCT TGTTGCTGCC AGAGAAGAAT ACCTGGGCGA GCATCTTCTT AAGGGCACCG TTTACTATTC CAGCGAGGCG CATCATATGG TAGCCAAGGC GGCTCGGGTT GCGGGTATCG CAGGGAGAAA TTTGCGTCCA ATTCAAGTCG ATGGACGGTT TCGCTTGCGG GCCGATCTGC TGGAAGAAAC TGTGCGCCAA GATCGGGAGC AGGGATTATT GCCATTTTTT GTTTGCGGCA CCGCCGGCAC GGTCAACACG GGCGCAATAG ATCCTCTGGC TAAGATTGCA GCGGTAGCGG CAAAGCATGA GCTTTGGTTT CATATTGACG GTGCTTATGG AGCTGCCTTT CGCATGGTAC CGGAGTTGCA ATCCCTATTT AAAGGGATGG AGCGAGCGGA TTCCTTGGCA ATGGACCCTC ATAAAGGGCT CTTTTTAGCC TATGGGACTG GAGCTCTACT CATGCCGGAT ATGGCAAATC TACGCCGGGC ATTTAGCGCT TCGGCGGCTT ATATGCCAGC CTTTCAGGAA AGCGAAGAGC ATTTAGACTT TTGCGAATTA TCACCAGAGC TCTCTCGTGA ATGGCGGGGA CTGCGCCTGT GGTTACCTTT TAAGCTCCAT GGCGTGGCTG CTTTTCGGCA TGCATTGGCA GAAAAGCGTC GCTTGGCTGT CCAAGCCTGG CAGCGGCTTT CCCGAGAGCC TGATGTGGAG ATGGCTGCAC CTCCTGAACT TTCCCTTTTT GCTTTTCGGC AGCGTTTCCA AGGGATCAAT AGGGAAGAGG AAAATCGCCG GAACCAAGTG CTCTTGAGGC GCATTAACGC GCCTCGCCGC ATCATGTTGA CCGGGACTGA AGTTGGTGGT CGCTATTTTC TGAGAATCTG TATTTTGCAG CTGCGCACCC ATGAAGCTAT CTTAAACGAG GGGCTCGAAC TTATTCTGGA AGCGCTTGCT GAAGCGAGAA ATAGTTTTTA A
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Protein sequence | MVKNTDNQRI NDEKPMNPSI LDERLSALDP SPAQLQKLLD EVGRRLAAFV ETIDRQPAQA ADYFDPQASW LRESIPETPS APGEVLDFIF GQVIPFAFNP ASPGYLAHVP GGGLFSSALG ELIAATVNRY TGVWAAAPAA VEMETQLLRW LAELMGLPRG SLGLLTSGAS MSTLIALVAA REEYLGEHLL KGTVYYSSEA HHMVAKAARV AGIAGRNLRP IQVDGRFRLR ADLLEETVRQ DREQGLLPFF VCGTAGTVNT GAIDPLAKIA AVAAKHELWF HIDGAYGAAF RMVPELQSLF KGMERADSLA MDPHKGLFLA YGTGALLMPD MANLRRAFSA SAAYMPAFQE SEEHLDFCEL SPELSREWRG LRLWLPFKLH GVAAFRHALA EKRRLAVQAW QRLSREPDVE MAAPPELSLF AFRQRFQGIN REEENRRNQV LLRRINAPRR IMLTGTEVGG RYFLRICILQ LRTHEAILNE GLELILEALA EARNSF
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