Gene Noc_2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2976 
Symbol 
ID3707358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3363411 
End bp3363746 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content47% 
IMG OID637739450 
Productanti-sigma factor antagonist 
Protein accessionYP_344948 
Protein GI77166423 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.467221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAC ACACGGAAAA AACCAACGGG GCCGTGGTCC TCTACATCAA GGAAAAACGC 
CTCGATGCCC ACAACTCGGG GGAATTAAAG GATCGAATGT TAGAGTTAGG GGAAGGCGGA
AAAGTCTATC TGATCGTGGA TTTAGAAGAG GTCCGGTTTA TTGACAGCTC TGGTCTTGGT
GCATTGCTAT CGGGGCATAA AAATACAACC CTTCGGAATG GAAGCTTTAA ATTGTGTGGC
CTTCAATCCC AAGTACAATC AATGTTCGAG CTTACCCGCT TGCACCGGGT CTTTGATATC
TATCCTTCCG TTCAGGAAGC CCTCGGCAAC AACTAA
 
Protein sequence
MNLHTEKTNG AVVLYIKEKR LDAHNSGELK DRMLELGEGG KVYLIVDLEE VRFIDSSGLG 
ALLSGHKNTT LRNGSFKLCG LQSQVQSMFE LTRLHRVFDI YPSVQEALGN N