Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2976 |
Symbol | |
ID | 3707358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3363411 |
End bp | 3363746 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637739450 |
Product | anti-sigma factor antagonist |
Protein accession | YP_344948 |
Protein GI | 77166423 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.467221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAC ACACGGAAAA AACCAACGGG GCCGTGGTCC TCTACATCAA GGAAAAACGC CTCGATGCCC ACAACTCGGG GGAATTAAAG GATCGAATGT TAGAGTTAGG GGAAGGCGGA AAAGTCTATC TGATCGTGGA TTTAGAAGAG GTCCGGTTTA TTGACAGCTC TGGTCTTGGT GCATTGCTAT CGGGGCATAA AAATACAACC CTTCGGAATG GAAGCTTTAA ATTGTGTGGC CTTCAATCCC AAGTACAATC AATGTTCGAG CTTACCCGCT TGCACCGGGT CTTTGATATC TATCCTTCCG TTCAGGAAGC CCTCGGCAAC AACTAA
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Protein sequence | MNLHTEKTNG AVVLYIKEKR LDAHNSGELK DRMLELGEGG KVYLIVDLEE VRFIDSSGLG ALLSGHKNTT LRNGSFKLCG LQSQVQSMFE LTRLHRVFDI YPSVQEALGN N
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