| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2952 |
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| Symbol | |
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| ID | 3706434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3338926 |
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| End bp | 3340632 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637739429 |
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| Product | Sodium/hydrogen exchanger, TrkA-N |
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| Protein accession | YP_344927 |
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| Protein GI | 77166402 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT ATCTCATCCA AATTATCCTG CTTTTGGCCA CGGCGATCAC TGTCGTGGTT
ATTTTTCAGC GCTTTCATAC CCCGACCAGC CTGGGATATT TGTTGGTAGG GATAGTGCTT
GGACCGTACA CGATCGGACC GGTAGTTGCC ATGCCGGAGC TGGAAGCGTT TGCCGAATTC
GGTGTTGTTT TCCTGCTGTT TACCATAGGC CTTAATTTCT CTCTGCCCCA AATACACGCC
TTGCGACACC AGGTTCTTGG GCTGGGTACC GGGCAGGTAG CGTTCACCAC CCTGGTGGTT
GGGTTGGTAG TGTGGCTCGC AGGATTACCG GTTGCCGCCG CGTTCGTGTT CGGCGCCGTT
TTTGCTCAAT CTTCCACAAT AATTATTGCC AGCCTGCTCA CCGAGCGGGG CGAGGAGAAT
ACTCAGCATG GCCGTCTTGG GCTTGCAATG TCGGTTTTTC AAGATGTTAC GGCCGTTCCA
TTTCTTGTGG CCATCCCTGT GCTGGGTACG TCGGTCACAG CGGATGTGCT GGCGGGAACG
CTGGGCTTGG CCCTTGCAAA AGCCGTGCTT GCCTTCGTGC TTGTCTTTTT TGCCGGGCGC
TGGTTGCTGG GCCCGTTGTT TCATGTGGTT TCCGAGCGCA GATCGGTTGA AATTTTCACC
TTGGCTGTGC TGCTGGTTGC TTTGCTTGCC GCTTGGATCA CCAATAGCCT GGGTTTGTCG
CTGGCATTCG GCGGCTTTCT TGCCGGGATG ATGCTGGGCG AAACGGAGTT TCGCCACCAG
GTAGAGTCAA GTATTCGTCC ATTTCGGGAC GTATTATTGG GGCTGTTTTT TATCGGCATT
GGTATGCGCT TCAGCCCGGC GGCGATACTC CCCATATGGC ACTGGACCGT GCTGGGCGCG
TTGCTTATTG TGACGAGCAA GACGTTGATT GTTGCCGCTA TGGTGCGTGG GACAGGGATC
GATACCCGGG TAGCGTGGCA AACCGGACTG ATGGTGAGTG TGGGTGGTGA ATTTGGGCTC
GCTCTCATCG CTATCGCGCT CGATTCCGGC GTGATTGCCA TGCAACTGGG TCAAATTGCC
ATCACCTCCG TGCTTCTGTC GATGATTGCT GGCGCTCTGC TGATCCGTTT CAATGGCACT
ATAGCGAAGT GGTTAGTCAA AACGCCTCGG GCAACAACCC ATGATACAGC GGAATTACAG
GAGGCCCCGG AAAAACAAGT GGTGATCGGC AGCTATGGGC GAGTGGGCCA CACCATCGCC
GTTCTATTGC ACTCATGCGG CGTTCCCTTT GTGGCTTTTG ACACCGATCC GAAGCGGGTA
GCCCAGGGGC GGGCGGATGG GCATGCGGTC TGGTTCGGCG ACATTGCCGA TCCGGGATTG
CTGTCTTCCA TTCATGTGGA AAGGGCTTCT CTAGTCGTAG TCGCCGTTGA CAGCCCCGGC
ACCGCATTAG GTGTGATGTC GTATATAAAT AGAACCTGTC CGCAGGTGCC GGTGATCGTA
CGGGCGCGGG ATCTCGAAAC CAGTACACGC CTGCTTGCTG CCGGTGCTGC TCGCGCTTAT
CCGGAAACGA TTGAGTTGAG TTTGCGCCTT AGTGTCACCG CGATGGAGAT GCTCAATGTA
TCGTCCGATG AGATCGACGA GATGGTTCAG GGCGTGAGAG ATCGAGGCTA CCAGCCTATT
CTAGAAGATG AGACCAATAA ACCGTAA
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| Protein sequence | MMEYLIQIIL LLATAITVVV IFQRFHTPTS LGYLLVGIVL GPYTIGPVVA MPELEAFAEF
GVVFLLFTIG LNFSLPQIHA LRHQVLGLGT GQVAFTTLVV GLVVWLAGLP VAAAFVFGAV
FAQSSTIIIA SLLTERGEEN TQHGRLGLAM SVFQDVTAVP FLVAIPVLGT SVTADVLAGT
LGLALAKAVL AFVLVFFAGR WLLGPLFHVV SERRSVEIFT LAVLLVALLA AWITNSLGLS
LAFGGFLAGM MLGETEFRHQ VESSIRPFRD VLLGLFFIGI GMRFSPAAIL PIWHWTVLGA
LLIVTSKTLI VAAMVRGTGI DTRVAWQTGL MVSVGGEFGL ALIAIALDSG VIAMQLGQIA
ITSVLLSMIA GALLIRFNGT IAKWLVKTPR ATTHDTAELQ EAPEKQVVIG SYGRVGHTIA
VLLHSCGVPF VAFDTDPKRV AQGRADGHAV WFGDIADPGL LSSIHVERAS LVVVAVDSPG
TALGVMSYIN RTCPQVPVIV RARDLETSTR LLAAGAARAY PETIELSLRL SVTAMEMLNV
SSDEIDEMVQ GVRDRGYQPI LEDETNKP
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