| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2950 |
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| Symbol | |
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| ID | 3706432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3335831 |
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| End bp | 3337600 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637739427 |
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| Product | ABC efflux pump, fused ATPase and inner membrane subunits |
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| Protein accession | YP_344925 |
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| Protein GI | 77166400 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.183404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATC ATCAATCTTC AATTCGTCCT CGTTGGCAAA CCATGAAAAT GGCGGCAATC
TTTATTGCTC CTTACAAATG GCAGGTATTT TACAGTCTAA TCGCCCTGGT GTTCACGGCA
GCAATCACGC TTTCCATTGG GCAAGGCATC CGCCTGTTGA TTGATCGTGG TTTTGCAACC
CATTCGACGG ATATATTAAC CCAATACGTT TCCATATTTT TTTTATTAGT TATTGCCCTT
GCGATAGGCA CTTTCACACG CTATTACTGG GTGACATGGC TAGGCGAGCG GGTTATCGCC
GATATTCGCC GTAGAGTATT TGACCACCTT ATCGATCTGC ACCCTGGTTT TTTTGAAAAA
AACCGCAGCC TTGAAATTCA GTCACGATTA ACGGCCGATA TGACATTGCT CCAGTCAGTG
ATTGGATCAT CGGTATCATT CGCCTTGCGT AATTTTATTA TGATGGTCGG TGGCATTATT
TGGCTATTCA TCACCAATGC AAAACTAACC GCCATTGTCA TGATTTGCGT GCCACTGGTA
GTCATGCCCA TTTTGATATT CGGGCGGCGG GTACGCAAGT TATCGCGTCA AAGTCAAGAA
AAAGTTGCTA TTGTAGGCGC TTATATTGGC GAGATACTTG GACAAATCAA AACGGTACAA
GCTTACAACC ATCAGGAAAT AGATAAAAAA AATTTCCATT ATCATGTTGA AGAGGCTTTT
ACCGTCGCTA AGAACCGGAT CATACAACGT GCGCTACTGG TCACCCTGGT TATTATTCTG
GTATTAGGCG CTGTCGGTTT AATGCTATTA ATTGGTGGTA TGGATGTCAT TGACGGAAAA
ATTAGCGGTG GCGAGCTTGC CGCTTTTGTT TTTTACAGTG TCATCGTGGG TTCAGCCGTC
GCTTCTATCT CAGAGGTTAT CGGTGAACTA CAACGTGCGG CTGGTGCCGC TGAACGCACT
ATAGATTTAT TGGCTACGCC AAACGAAATA CAGTCTCCAT CTAAACCGCA AACACTGCCA
CCGGTCTCGG GTAATATCGA GATTGAACAC TTAATCTTTG CCTATCCTTC ACGTCCAGAC
GTCCGTGTAA TCAATGAGCT ATCACTGACC ATCAAAGCAG GGGAAACCCT AGCATTGGTG
GGTCCTTCAG GCGCGGGCAA ATCAACCTTA TTTGATTTAT TATTACGTTT CTTTGACACC
TACACGGGTT CCATCAAGCT AGAGGGTATC GATATCCGGC AGCTCAATAT CTCCAAGCTG
AGGCAATGCT TTGCGCTGGT ATCCCAGAAT CCAGCTTTAT TTCATGGCAG TATCATAGAC
AATCTCCGCT ATGCCCGACC CGATGCGCTC GATACCGAAG TTGAAGCCGT GGCAAAAGCG
GCCCATGCCC ATGAGTTTAT TTGTAAACTG CCGCAAGGTT ATGATACCCA GCTAGGAGAT
GCTGGATTAG GACTATCGGG GGGCCAAAAA CAACGGCTTG CCATTGCGCG GGCAATACTG
GCGAATGCCC CTATTTTATT ACTGGACGAA GCAACCAGCG CGTTAGATTC GCAAAGTGAA
TTTTGGGTTC AGCAAGCGCT GGAAAAATTA ATGGTTAACC GTACCACACT GGTCATTGCT
CATCGACTAT CAACGGTAAA AACAGCTGAT AGAATTGCCG TCCTTGATCA AGGACGGCTG
GAAGCTTTGG GTTCCCATGC GGAACTAATG AAATGCAGCG AGCTATATTC ACAGCTGGCA
ACCTTGCAGT TTCAGCATAA CTTGCATTAA
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| Protein sequence | MINHQSSIRP RWQTMKMAAI FIAPYKWQVF YSLIALVFTA AITLSIGQGI RLLIDRGFAT
HSTDILTQYV SIFFLLVIAL AIGTFTRYYW VTWLGERVIA DIRRRVFDHL IDLHPGFFEK
NRSLEIQSRL TADMTLLQSV IGSSVSFALR NFIMMVGGII WLFITNAKLT AIVMICVPLV
VMPILIFGRR VRKLSRQSQE KVAIVGAYIG EILGQIKTVQ AYNHQEIDKK NFHYHVEEAF
TVAKNRIIQR ALLVTLVIIL VLGAVGLMLL IGGMDVIDGK ISGGELAAFV FYSVIVGSAV
ASISEVIGEL QRAAGAAERT IDLLATPNEI QSPSKPQTLP PVSGNIEIEH LIFAYPSRPD
VRVINELSLT IKAGETLALV GPSGAGKSTL FDLLLRFFDT YTGSIKLEGI DIRQLNISKL
RQCFALVSQN PALFHGSIID NLRYARPDAL DTEVEAVAKA AHAHEFICKL PQGYDTQLGD
AGLGLSGGQK QRLAIARAIL ANAPILLLDE ATSALDSQSE FWVQQALEKL MVNRTTLVIA
HRLSTVKTAD RIAVLDQGRL EALGSHAELM KCSELYSQLA TLQFQHNLH
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