Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2871 |
Symbol | |
ID | 3705584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3251695 |
End bp | 3252648 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637739347 |
Product | cation efflux protein |
Protein accession | YP_344847 |
Protein GI | 77166322 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTC AAACCGAAAA TAAGCTTAAA AAGGCGATAT TTCCTTCGGA AACCGTCCTT ATATCTCGTG ATCATGCTCG GATTACGCAG CGTGCCACCT ATGCCGCCGT GTCGGTGGCG GTAATTCTTG TGGTGATTAA GTTAGGTGCT TACCTAGTGA CGGGCTCTGT AGCTATGCTC TCCGCTTTGA TTGACTCTGC CCTAGATGTG GCGGCTTCCC TGATTAATGT GTTTGCGGTG CGTACCGCGC TGACGCCAGC TGATCGGGAG CACCGTTTTG GTCATGGTAA AGCTGAACCC TTGGCTGGGT TAGGCCAGGC GGCTTTTATT ACGGGGTCCG CGCTTTTTCT AGCGGTGGAA TCCATAAGGC TACTATGGGT ACCGCAGCCA GTAGAAAATG GCGCTTTAGG TATAGGCGTG ATGGGCGTAT CCACTATGCT GACGCTTGCC TTAGTCTACT ATCAGCGCGG CGTAATACGT AAGACGGGTT CCCTGGCGAT TAGCGCGGAC TCGCTCCATT ACACGGGGGA TGTGCTGGTT AATTTGGGGG TTATAGCGGC TATTGGGTTA AGCACGCTTG GGGGCTGGAC TCTGGCTGAT CCACTGTTTG CGTTGGGTAT TGCAGCTTAT ATTTTATGGA CTGCCTGGCA AATTATTTTC CGCTCGCTGG ACCAGCTCAT GGACCGGGAG CTGCCGGAAG AAAAGCGCGC GCAGATTACC CAACTTGCTT TATCCCATCC TGAAGTGCTC GATTTCCATG ATCTCCGGAC ACGAGCTGCC GGCCAAAATA TATTTATTCA ATTTCATCTA GGTGTGGATG GGCAGTTAAG TTTGTACCGG GCCCATCGGA TAGGGAAAGA AGTAGAGGCT AAGGTCTTGA ATATTTTTCC CCAAGCAGAG ATTATTATCC ACCAGGATCC GATAGACAAG GACAAAGAAG ATTCGCTCGG GTAG
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Protein sequence | MKAQTENKLK KAIFPSETVL ISRDHARITQ RATYAAVSVA VILVVIKLGA YLVTGSVAML SALIDSALDV AASLINVFAV RTALTPADRE HRFGHGKAEP LAGLGQAAFI TGSALFLAVE SIRLLWVPQP VENGALGIGV MGVSTMLTLA LVYYQRGVIR KTGSLAISAD SLHYTGDVLV NLGVIAAIGL STLGGWTLAD PLFALGIAAY ILWTAWQIIF RSLDQLMDRE LPEEKRAQIT QLALSHPEVL DFHDLRTRAA GQNIFIQFHL GVDGQLSLYR AHRIGKEVEA KVLNIFPQAE IIIHQDPIDK DKEDSLG
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