| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2865 |
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| Symbol | |
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| ID | 3705406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3244711 |
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| End bp | 3246075 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637739341 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase |
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| Protein accession | YP_344841 |
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| Protein GI | 77166316 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.300643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGG GATTCGCCAT GAGTCTGAGA GAACTAACTT CTGCAGTTCA GGGGCGGTTG
CAGGGGGCAA ATGTTGCTGC GAGCGGGGTG AGTACTGATA CTCGTTCCTT AGTGCCTGGG
TCCTTGTTTG TAGCGTTGAG AGGGGAGCGT TTTGATGGCC ATGCCTTTAT CGCCCAAGCG
CGGGAAAAAG GGGCAAGTGC TGCCCTGTTA GAACAAGCGA TTAATGATCC GCTACCCCAG
ATTGAGGTTG CAGATGCCCG AATCGCCTTA GGTCAGTTAG CAGCCTGCTG GCGCCAGCGT
TTTGTCCGTC CCATCGTAGC GGTGACCGGC AGCAATGGTA AAACCACAGT TAAGGAGATG
ATAGCCTCGG TCCTAGGCTG GAGGGAGCCT GTATTGGCGA CCCGAGGTAA TCTTAATAAC
GATATCGGTG TTCCTTTGAC CTTGTTGGAG CTCGATACAA GTCATCGTTT TGCTGTAATC
GAGATGGGTG CTAACCGGCC TGGCGAGATT GAATATTTGA GTCGTTTGAC GCGTCCTCAG
GTGGCCCTCA TTACCAATGC GGGGCCAGCC CATTTAGATG GATTTGGCGA TCTCAAGGGA
GTGGCTCGCG CTAAGGGGGA AATTTTCCAG GGGATGGGCT CAGAAGGCGT TGCCATTCTT
AATGCCGATG ACCCTTGTTT TAGCTATTGG CGAGATTTGG CAGGCGAGCT GCCGGTGATA
GGGTTTGGTT TAAGCAAATC CGCGGAAGTA ACGGCCCGTC ATGTAGTGGC TTCTACTGGG
AGTAGCTGTT TCACCCTCAT TACTCCTGCC GGCAAGGCTA AGATTCAGTT ACCCTTGCCT
GGACGGCATA ATGTTCTTAA TGCCCTTGCG GCAAGCGCCG CTACCATTGC CCTGGGAGTG
GACCGGCAGC ATCTGAGCGC TTCTCTGGCA GCTTTGTCCT CTGTTCCAGG CCGGTTGCAG
ATCCGCCGGG GAATCGGTGG GATGCGGCTG CTTGACGACA CTTACAATGC CAACCCTGCC
TCTTTTCAAG CAGCCTTGGA ATTGCTCGCC AAATTTCCTG GAGAACGTGC CCTGGTGCTG
GGCGATTTTG CCGAACTTGG AGAAGAAGCG GCCTCTTTGC ATCGAATCAT GGGAAAACAG
GCTCGGGCAG CGGGTGTGAA CAGACTTTAT ACCCTGGGTC GTCTGGGTGC TTTTGCGGCG
GAAGCTTTTG GGCGGGGGGC ATTGCATTTT TTAGAGCAGC GGTCCTTACT GGAGGTTTTG
CAAGAGGAGT TGCATCCTAA TATCACCCTG CTGGTAAAGG GCTCCCGCTG TATGCGTATG
GAGCAAATAG TCGCGGTTTT GAGCAGCAGC GGGGAGAGCG GTTAG
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| Protein sequence | MARGFAMSLR ELTSAVQGRL QGANVAASGV STDTRSLVPG SLFVALRGER FDGHAFIAQA
REKGASAALL EQAINDPLPQ IEVADARIAL GQLAACWRQR FVRPIVAVTG SNGKTTVKEM
IASVLGWREP VLATRGNLNN DIGVPLTLLE LDTSHRFAVI EMGANRPGEI EYLSRLTRPQ
VALITNAGPA HLDGFGDLKG VARAKGEIFQ GMGSEGVAIL NADDPCFSYW RDLAGELPVI
GFGLSKSAEV TARHVVASTG SSCFTLITPA GKAKIQLPLP GRHNVLNALA ASAATIALGV
DRQHLSASLA ALSSVPGRLQ IRRGIGGMRL LDDTYNANPA SFQAALELLA KFPGERALVL
GDFAELGEEA ASLHRIMGKQ ARAAGVNRLY TLGRLGAFAA EAFGRGALHF LEQRSLLEVL
QEELHPNITL LVKGSRCMRM EQIVAVLSSS GESG
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