| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2851 |
|---|
| Symbol | |
|---|
| ID | 3705392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3228058 |
|---|
| End bp | 3230769 |
|---|
| Gene Length | 2712 bp |
|---|
| Protein Length | 903 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637739327 |
|---|
| Product | SecA protein |
|---|
| Protein accession | YP_344827 |
|---|
| Protein GI | 77166302 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACTA ATTTACTCAG CAAGGTATTT GGCAGCCGCA ATGATCGCTT GTTGCGGAGC
GTGAATAAAG TCGTGGCGCA AATTAATGCT TTGGAGCAGG AATTTGCAGC GCTTAGCGAT
GGGCAGTTAC AGGCTAAAAC CGACCAGTTC CGGGATCGGC TTGCCGCAGA TGAAAGTTTA
GATGAACTCA TACCCGAAGC CTTTGCCGTG GTCCGGGAAG CGGGTAAGCG GGTTCTTGGC
ATGCGCCACT TTGATGTTCA ACTTTTGGGC GGTATCGTGC TCCACGATGG CAAGATTGCT
GAGATGCGTA CGGGGGAGGG TAAAACTTTG GTGGCCACCG CAGCTGCTTA CCTCAACGCT
TTGCCTGGTA AAGGGGTCCA TGTGGTGACG GTTAATGACT ATCTGGCCCA GCGTGATGCT
CAATGGATGG GACCGCTTTA CCAGTTCCTG GGCCTTTCTA CGGGGATTAT CGCTTCCAAT
ATGGATCCTG GTGCTCGAAA AGCCGCCTAC ATGGCGGATA TTACGTATGG CACCAATAAT
GAATTTGGCT TTGATTACTT ACGCGACAAC ATGGCCTTTA GTTTGGAAGA AAAGGTACAA
CGGGAACTGC ACTATGCCAT TGTGGATGAA GTCGACTCTA TCTTGATTGA CGAGGCCCGT
ACTCCCTTGA TTATCTCCGG CGCCGCAGAG CAGAGTTCCG AACTTTATCG GCAAATCAAC
GTCTTTATGC CCCGTTTAAA GAAGCAAGAG AGGGAAGATG GGCCGGGTGA TTACACGGTG
GATGAGAAAG CGCGCCAAGT ATATTTGACC GAAGCGGGAC ATGAGCACGC GGAGCAGGTT
ATGCTCGAGT CGGGCTTAAT GCAAGAAGGA GAAAGCCTCT ATGATGCCGC CAATATTGGC
TTGATGCATC ATTTTAACGC GGCCTTGCGG GCCCATGTGC TTTTCCATAA GGACGTCGAC
TATATCGTTA AGGACGATCA GGTGGTGATC GTGGATGAGT TTACGGGCCG CACCATGCCT
GGCCGAAGGT GGTCGGAGGG GCTTCATCAA GCGGTGGAAG CCAAGGAGGG GGTGTCCATC
CAAAGCGAAA ACCAGACTTT GGCCTCTATT ACCTTCCAAA ACTATTTTCG TCTCTACGAG
AAATTAGCGG GGATGACGGG GACGGCGGAT ACTGAGGCTT ATGAATTCCA ACAGATTTAT
GGCTTAGAAG TCGTGGTCAT TCCTACTCAC CTTCCCATGG TCCGGGTTGA CCATGGGGAC
CAGGTCTATT TGACCGCGGA AGAAAAATAC CAGGCCATTA TTGAAGATAT CAAGGATTGC
CACACCCGGG GCCAGCCTGT GCTGGTGGGG ACTGCTTCCA TTGAGACCTC CGAGCATCTC
TCGGGGCTGC TTAAAAAAGA AAAAGTTGAA CACCGAGTGC TCAATGCTAA ATTTCATGAG
AAGGAGGCTG AGATCATTGC TCAGGCTGGC CGGCCCGGCA CGGTTACTAT TGCGACAAAC
ATGGCCGGCC GCGGTACCGA CATTGTGCTT GGCGGTAGCT TGGATGCGGA ATTAGCGACC
CTAGGCGAGA ATGCGGATAA GGCGAAAAAA GAAGAAATAC GGCGCCGGTG GCAAGAAGGT
CATGACCAGG TTGTGGCAGC TGGAGGACTG CATATCATTG GTACTGAACG CCATGAATCA
CGACGTATTG ACAATCAGCT TCGGGGACGG TCCGGGCGCC AGGGAGATCC GGGTTCCACT
CGTTTTTACT TATCCTTGGA AGACAACCTG ATGCGCATTT TTGCCTCGGA ACGAATTTCG
GGCCTGATGC AAAGGTTAGG TATGGAAGAA GGGGAGGCTA TTGAACATCC GTGGGTCACC
CGTGCTATCG AAAATGCCCA GCGTAAAGTT GAGGGTCACA ACTTCGATAT CCGCAAGCAA
TTGCTAGAGT TTGATGATGT GGCCAATGAT CAACGTACGG TGATCTATCA GCAGCGTAAT
GAATTGATGG CGGCAGAGGA TGTTTCGGAC ATGGTCCAAA GCATTCGCCA GGGCGTAATT
CACTCTCTAG TCAGCCAATA CATTCCCCCG GGGAGTATTG ACGAACAATG GGATATTCCG
GGATTACAGG AAGGGCTGGC GAGTGAATTC GGTCTTGAGG TGGATATTGC TGGTTGGCTG
GAAGCCGATG AAGGTCTCCA CGAGGAGACC TTGCGGGAAC GTATTATGGA AGCGATGGAA
GGCGCTTATG GAGAAAAAGA GACCTTGGTT GGTCCCCAAG TGATGCGCCA TTTTGAGAAA
GCAGCCATGC TACAGGTATT GGATTCCCAA TGGAAGGAAC ATCTTGCAAT GATGGACCAC
TTACGCCAGG GTATTCATCT GCGCGGTTAT GCCCAAAAGA ATCCCAAACA GGAGTTCAAG
CGAGAGGCTT TCGAATTATT TCAAGAGATG TTGGAGCGGA TTAAGCATGA TGTCATTGCG
CTCCTTTCCA AGGTGCAGGT GCGTACCGAG GCCGATGTGG AGGCGGTGGA GCATCAACGC
CGCGCTGCCA GCGCGGTAGA ATACCAGCAT GCAGCGGCAA GTACGATGGC GGATAGTTCT
GGCGATGTAA AATCCTCGAC TGCTGAATCC AAGGCGCCTT ATGTCAGGGA TGGTCGGAAA
GTAGGTCGTA ATGAGCCTTG TCCCTGTGGT TCAGGAAAGA AATACAAGCA TTGCCACGGT
AAATTGAATT GA
|
|---|
| Protein sequence | MVTNLLSKVF GSRNDRLLRS VNKVVAQINA LEQEFAALSD GQLQAKTDQF RDRLAADESL
DELIPEAFAV VREAGKRVLG MRHFDVQLLG GIVLHDGKIA EMRTGEGKTL VATAAAYLNA
LPGKGVHVVT VNDYLAQRDA QWMGPLYQFL GLSTGIIASN MDPGARKAAY MADITYGTNN
EFGFDYLRDN MAFSLEEKVQ RELHYAIVDE VDSILIDEAR TPLIISGAAE QSSELYRQIN
VFMPRLKKQE REDGPGDYTV DEKARQVYLT EAGHEHAEQV MLESGLMQEG ESLYDAANIG
LMHHFNAALR AHVLFHKDVD YIVKDDQVVI VDEFTGRTMP GRRWSEGLHQ AVEAKEGVSI
QSENQTLASI TFQNYFRLYE KLAGMTGTAD TEAYEFQQIY GLEVVVIPTH LPMVRVDHGD
QVYLTAEEKY QAIIEDIKDC HTRGQPVLVG TASIETSEHL SGLLKKEKVE HRVLNAKFHE
KEAEIIAQAG RPGTVTIATN MAGRGTDIVL GGSLDAELAT LGENADKAKK EEIRRRWQEG
HDQVVAAGGL HIIGTERHES RRIDNQLRGR SGRQGDPGST RFYLSLEDNL MRIFASERIS
GLMQRLGMEE GEAIEHPWVT RAIENAQRKV EGHNFDIRKQ LLEFDDVAND QRTVIYQQRN
ELMAAEDVSD MVQSIRQGVI HSLVSQYIPP GSIDEQWDIP GLQEGLASEF GLEVDIAGWL
EADEGLHEET LRERIMEAME GAYGEKETLV GPQVMRHFEK AAMLQVLDSQ WKEHLAMMDH
LRQGIHLRGY AQKNPKQEFK REAFELFQEM LERIKHDVIA LLSKVQVRTE ADVEAVEHQR
RAASAVEYQH AAASTMADSS GDVKSSTAES KAPYVRDGRK VGRNEPCPCG SGKKYKHCHG
KLN
|
|---|
| |