| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2808 |
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| Symbol | |
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| ID | 3705288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3182378 |
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| End bp | 3184375 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637739284 |
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| Product | transketolase |
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| Protein accession | YP_344785 |
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| Protein GI | 77166260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000368556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCTC GCAGAGAACT GGCTAATGCT ATCCGTGCGC TTAGTATGGA CGCAGTGCAA
AAGGCGAAAT CTGGCCACCC TGGGGCACCT ATGGGGATGG CAGATATCGC TGAAGTATTA
TGGAATGATT TTCTCACGCA TAATCCTAAC AATCCCCACT GGGTGGACCG GGATCGATTC
GTGCTTTCCA ATGGGCATGG CTCCATGCTG CTCTATTCCT TACTCCACTT GAGCGGTTAT
GGCGTGAGCA TGGAGGATCT CAAGCAGTTC CGCCAGCTTC ATTCCAAGAC ACCAGGCCAT
CCAGAATATG GATATGCCCC TGGTATTGAG ACAACCACCG GGCCATTGGG TCAAGGTCTT
AGTAATGCTG TCGGCATGGC CCTGGCTGAG AAAGTATTGG CGGGCCAGTT CAACCGAGAT
GGTCATGAAA TCGTTGATCA TTATACCTAT GTATTCCTCG GAGATGGCTG CTTGATGGAA
GGGATTTCCC ATGAATCCTG CGCCTTGGCG GGTACTTGGG GATTAGGGAA GCTGGTTGCT
TTCTATGACG ACAATGGTAT TTCCATTGAT GGAGATGTGG CGGGATGGTT TACCGACGAT
ACGCCGAAGC GTTTCGAGGC TTATGATTGG CACGTTATAC GGGATGTGGA TGGACACGAC
TCAGAGGCTG TGCGCCAAGC CACTGAAGAG GCGCGCTCAG TCATCGATAA ACCTACCCTC
ATTTGCTGTA AGACATTGAT TGGCTATGGT GCTCCTAATT TAGCGGGAAG CCATGATTGT
CATGGGGCAC CGCTTGGAGA AGATGAGATT GTGGCTACCC GTGACAAATT AGGTTGGCCT
CACCCCCCTT TTGCAATTCC AGAGGAAATT TATGAGGGTT GGAATGGGGC TGAAAAAGGC
AAGGCGGCGG AGGCAGCTTG GGATGAAAAG TTTGCTGCCT ATAAAGCTAC TTATCCAGAA
TTGGCAGCGG AATTTAAGCG TCGTCTCCAG CGTAAACTTC CTGAAAATTG GGAAACGACC
GCCGCTGAAG TTATTCAGGC GGCTGCTGTC AAGGCCGAAA AAATTGCTAC TCGCAAGGCA
TCTCAAAATG CTCTCGAAGC TTACGCGCCA GTCTTGCCAG AGCTATTGGG AGGATCGGCG
GACTTGACCG GCTCTAACCT TACCCATTGG TCAGGTTCAA AAGTGCTCGG TAAAGCTGCC
CCTGAAGGTA ATTACATCCA CTATGGTGTG CGGGAGTTTG GGATGTCGGC CATTATGAAT
GGAATTGCCC TGCATGGCGG CTTTATTCCC TATGGCGGGA CCTTTCTAAT GTTCTCCGAA
TATGCCCGTA ACGCGGTGCG GATGGCTGCG CTCATGGGGG TGCAAAGTAT TTTTGTCTAT
ACCCATGATT CTATCGGATT AGGTGAAGAT GGGCCTACTC ACCAAGCGGT AGAGCAAGCG
GCGACCTTGC GCTATATTCC CCGTATGTCA GTATGGCGCC CCTGTGATGC GGTAGAAAGC
CTGGTTGCTT GGAGAGCGGC TATTGAGCGT CAAGAGGGGC CAACGTCCTT GCTATTTTCC
CGCCAGGGGT TGCCTCCCCA GGAGCGAACT CCTGAGCAAA TTGAAAATAT CCGCCGCGGT
GGCTATATCC TGCGCGATAC GGAGGGTAAG CCCGATGTCA TTATAGTGGC TACCGGTTCC
GAAGTGGCGC TGGCGATGGA AGCGGCTGAA ACTTTGGGAA GCAAGGGTGT CCAGGCGCGG
GTAGTTTCTA TGCCTTGCAC GGATGTCTTC GATGCTCAGA GTAAAGCCTA CCGGGAAGCG
ATTCTGCCCC CTGAAGTGCG GGCTCGCGTG GCGGTGGAAG CGGGAATCAC CGATTACTGG
CGGAAGTATG TGGGGCTTGA GGGTAAAGTA TTAGGCATTG ATACCTTTGG AGAATCAGCT
CCAGCTGAGG ATGTATTCCG GCATTTTGGC CTGACTGCGG AGAATTTGGC TAAGATCGCC
GAAGATATGG TTTCTTAA
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| Protein sequence | MPSRRELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WNDFLTHNPN NPHWVDRDRF
VLSNGHGSML LYSLLHLSGY GVSMEDLKQF RQLHSKTPGH PEYGYAPGIE TTTGPLGQGL
SNAVGMALAE KVLAGQFNRD GHEIVDHYTY VFLGDGCLME GISHESCALA GTWGLGKLVA
FYDDNGISID GDVAGWFTDD TPKRFEAYDW HVIRDVDGHD SEAVRQATEE ARSVIDKPTL
ICCKTLIGYG APNLAGSHDC HGAPLGEDEI VATRDKLGWP HPPFAIPEEI YEGWNGAEKG
KAAEAAWDEK FAAYKATYPE LAAEFKRRLQ RKLPENWETT AAEVIQAAAV KAEKIATRKA
SQNALEAYAP VLPELLGGSA DLTGSNLTHW SGSKVLGKAA PEGNYIHYGV REFGMSAIMN
GIALHGGFIP YGGTFLMFSE YARNAVRMAA LMGVQSIFVY THDSIGLGED GPTHQAVEQA
ATLRYIPRMS VWRPCDAVES LVAWRAAIER QEGPTSLLFS RQGLPPQERT PEQIENIRRG
GYILRDTEGK PDVIIVATGS EVALAMEAAE TLGSKGVQAR VVSMPCTDVF DAQSKAYREA
ILPPEVRARV AVEAGITDYW RKYVGLEGKV LGIDTFGESA PAEDVFRHFG LTAENLAKIA
EDMVS
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