| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2770 |
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| Symbol | |
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| ID | 3705500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3143180 |
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| End bp | 3145036 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637739246 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_344747 |
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| Protein GI | 77166222 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000172881 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGAC GATTTACGGT TAAAGATTTC TTTCTGATTC TATTTCTGAG TCTGCTGGCC
CTTCTCATTC TGCTCACCAT GTATATGGTT GATCGGCAAT GGCTCAAGCT CGCTGAAATG
GAACAAACTT TGACTGAGCA GGCCCGGGAT TTACGCGGGC TGCGCGATCT GCTACGCGGC
ACAGGCGGCG GGCTCACCCT AGCGCCCATG GGAAATCAGG ATACGGCCAT TATCCCACCC
GCATTCCAAC GCGCCTATGC CGCTACCCAA CAACCCGATT ACCATCCCGG CGACTGGTTC
GTGCAAGCTT TTGGCGCGGG ACTGACGACC TTGACTCCCC TCGTCTCCAC CGATGCCTAT
GCCGCCGAAG TCCAAGGCTA CATACTGGAA TCCTTGCTGA CACGCCACCC GGAAACTTTG
GATTGGCAAG GTCTGCTAGC CCGGGATTGG GAAGTCAGCG AGGATGGACT GGTTTTTCGT
TTCCACTTAC GGGAAGGACT CACTTTCTCC GATGGCGAAC CTCTTACTGC CGAGGACGTG
GCCTTCTCTT TCGCCTTTAT CATGAATCCC GCTATTGCCG CGCCCCGGGA GCGGGCTTAC
TATGAAAAAA TAGAGCGAGT CACCGCCCTG GGCCCCTACC AGGTGGAGTT CAAATTCAAG
GAACCCTACT TTAATAGTCT GGCTCTGGCC GGTGGCTTGG CCATCTTGGC CGAACATTTC
TACGAACCTT ATTTGGAGAA GCCGGAAAAA TTTAACCAAT CCAAAGGCTT ACTACTTGGC
TCCGGTCCTT ACCGCCTCCC AGATCCTAAA GGCTGGACTC CGGATCAAGG TCTGGTGGAG
CTGGAACGCA ACCCCCGCTA CTGGGGGCCG GTGCAGCCCT CTTTCGACAA ACTGCTATGG
AAGGTGATTG CCAATGACAG CGCCCGCCTG ACCACCTTCC GCAACGGGGA TATCGATATC
TACAGTGCCC GCCCGCTGGA GTATCAAAAA CTGCGGGAAG ATCAGGCATT GGCGGCGCGC
ACCCAGCATT TTGAATACAG GAGTCCCGCA GCGGGCTATA GCTACATTGC CTGGAACCAG
GAGCGAAACG GCAAACCTAC CCGCTTTGCT GATCGACGGG TCCGCCAGGC CATGACCTTT
CTTACTGATC GCGCCAGCAT GATTGAACAA ATCATGCTGG GCCATGGAGA AGCGGCGGTC
AGTCCATTCA ACCCCGACAG CCCTCAGCAT GATTCCACCC TCACCCCCCG GCCCTTCGAT
CTGGCTAAGG CCAAAACATT ATTGGCACAA GCGGGCTACG CCGACCGGGA CGGGGACGGA
GTTCTGGAAG ATGCTAATCA TCAGCCTTTC CGCTTTGAAC TGGTGTTCTT CCAGGATGCC
GATGACACCC GCCGTCAGGT GCTATTCCTT AAGGATCTGT ACGCCCGAGC CGGAATTTTG
CTTGAGCCCA AACCCACCGA GTGGTCGGTC ATGCTGGATC AAATTAGCAA AAAGAATTTT
GATGCTATCA CCCTGGGCTG GACCAGTGGA GTGGAAATCG ATATCTATCA AATGTTCCAC
AGCAGCCAAA CCGTAGCCGG CGGCGATAAT TTCATTGCTT ACCAAAATCC AGAACTGGAC
GAACTTATTG AAAAAGCGCG GGCGACAGTG GATGAAACCG AGCGTATGCC CCTGTGGCGA
GCCTGCGAGC GTATCTTGTA TGAAGACCAG CCCTATACTT TCTTGATGCG GCGTAAATCA
TTGGTATTTG TGGACCAGCG TATGCACAAT CTGGGAATCA CCCGTTTGGG CCTAAATCTG
GGCATGACCC CGGTAGAGGC GTACGTCCCG GAATCCAAGC AGAAGTATAC TTACTAA
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| Protein sequence | MARRFTVKDF FLILFLSLLA LLILLTMYMV DRQWLKLAEM EQTLTEQARD LRGLRDLLRG
TGGGLTLAPM GNQDTAIIPP AFQRAYAATQ QPDYHPGDWF VQAFGAGLTT LTPLVSTDAY
AAEVQGYILE SLLTRHPETL DWQGLLARDW EVSEDGLVFR FHLREGLTFS DGEPLTAEDV
AFSFAFIMNP AIAAPRERAY YEKIERVTAL GPYQVEFKFK EPYFNSLALA GGLAILAEHF
YEPYLEKPEK FNQSKGLLLG SGPYRLPDPK GWTPDQGLVE LERNPRYWGP VQPSFDKLLW
KVIANDSARL TTFRNGDIDI YSARPLEYQK LREDQALAAR TQHFEYRSPA AGYSYIAWNQ
ERNGKPTRFA DRRVRQAMTF LTDRASMIEQ IMLGHGEAAV SPFNPDSPQH DSTLTPRPFD
LAKAKTLLAQ AGYADRDGDG VLEDANHQPF RFELVFFQDA DDTRRQVLFL KDLYARAGIL
LEPKPTEWSV MLDQISKKNF DAITLGWTSG VEIDIYQMFH SSQTVAGGDN FIAYQNPELD
ELIEKARATV DETERMPLWR ACERILYEDQ PYTFLMRRKS LVFVDQRMHN LGITRLGLNL
GMTPVEAYVP ESKQKYTY
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