Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2669 |
Symbol | |
ID | 3705166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3024340 |
End bp | 3025587 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637739150 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_344652 |
Protein GI | 77166127 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC CCTTACCTCT TTATATTGGC CTGCGGTATA CGCGGGCTAA GCGGCGTAAT TATTTTATTT CATTCATTTC CTTGACCTCC ATGCTAGGCG TGGCGCTAGG CGTGGCTGCT TTAATTACCG TACTTTCCGT GATGAATGGT TTTGAGAAGG AACTCCGTAC CCGCATCCTG GGAATGGTTG CCCACGTCAT TGTCACCGGC CCCGATGGAA CCCTTGAGCA CTGGCAGGCC CTTAAGACCC AACTGGAAGA AAACGCTAAG ATAGCTGGAA TAGCCCCTTT TATAGAGGGA CAAGGTATGG CAACTCACCG CAATCAAGTA CAGGGCACAC TGGTACGCGG GATCCTCCCT CAACAAGAAG ATCAAGTGCT TGATATCCAC GGCAAGATGG TAGCAGGCAG CTTAGATGCT CTACGACCCG GAAGCTTCCA AATCGTATTG GGCATGGATT TGGCCCGCAC CCTAGGGGTT TTTATCGGCG ATAAGATTAC CCTGGTTACC CCTCACGCAA CCACCACGCC AGCGGGAATT ATCCCTCGTC TTAAGCGAGT CACAGTGGCA GGAGTTTTCC AAGTGGGGAT GTACGAGTAT GATAGCGCCC TTGCCATCAT GAACCTAGAG GATGCGGCGG TTCTCTTTCG CATTCCGGGA AAAGTCAGCG GACTTCGACT TAAGCTCGAC GATTTATTTA GCGCCCCCCG CCTCGCCCGC GAACTGCGCG AAACTTTACC CGGCAACTAC CGAACAGCGG ACTGGACCTA CCAACATGCC AATTTTTTTC GCGCCTTGAA AACGGAAAAA ACAGTCATGT TTGTCATTTT ATTTCTGATT GTCGCGGTAG CCGCCTTTAA CATTGTCTCC ACCTTGGTCA TGGTGGTGAC GGATAAACAA GCCGATATCG CCATTTTGCG CACCTTAGGG GCGACTCCAG CAAGTATTAT GGGAATCTTT ATGGTTCAAG GCACGGTTAT TGGCTTTATC GGCACCATTT TGGGCATGAT AGGGGGGATT ACCCTAGCGT TTAATGTAGA AACGGTAGTG CCCCAAATTG AAGCCTTGTT TGGCGTCCAA TTCTTACCCG CAGATGTCTA TTACATCAGC GAACTTCCCT CGGAACTGAA TTGGGATGAT GTCATTACCA TTTGCAGCAC GGCTTTCCTG CTCTGCCTTC TGGTAACCCT CTACCCCGCT TGGCAAGCCG CCCGCACCCA CCCTGCCGAG GCCCTGCGCT ATGAATAA
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Protein sequence | MFKPLPLYIG LRYTRAKRRN YFISFISLTS MLGVALGVAA LITVLSVMNG FEKELRTRIL GMVAHVIVTG PDGTLEHWQA LKTQLEENAK IAGIAPFIEG QGMATHRNQV QGTLVRGILP QQEDQVLDIH GKMVAGSLDA LRPGSFQIVL GMDLARTLGV FIGDKITLVT PHATTTPAGI IPRLKRVTVA GVFQVGMYEY DSALAIMNLE DAAVLFRIPG KVSGLRLKLD DLFSAPRLAR ELRETLPGNY RTADWTYQHA NFFRALKTEK TVMFVILFLI VAVAAFNIVS TLVMVVTDKQ ADIAILRTLG ATPASIMGIF MVQGTVIGFI GTILGMIGGI TLAFNVETVV PQIEALFGVQ FLPADVYYIS ELPSELNWDD VITICSTAFL LCLLVTLYPA WQAARTHPAE ALRYE
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