Gene Noc_2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2669 
Symbol 
ID3705166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3024340 
End bp3025587 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content51% 
IMG OID637739150 
ProductLolC/E family lipoprotein releasing system, transmembrane protein 
Protein accessionYP_344652 
Protein GI77166127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC CCTTACCTCT TTATATTGGC CTGCGGTATA CGCGGGCTAA GCGGCGTAAT 
TATTTTATTT CATTCATTTC CTTGACCTCC ATGCTAGGCG TGGCGCTAGG CGTGGCTGCT
TTAATTACCG TACTTTCCGT GATGAATGGT TTTGAGAAGG AACTCCGTAC CCGCATCCTG
GGAATGGTTG CCCACGTCAT TGTCACCGGC CCCGATGGAA CCCTTGAGCA CTGGCAGGCC
CTTAAGACCC AACTGGAAGA AAACGCTAAG ATAGCTGGAA TAGCCCCTTT TATAGAGGGA
CAAGGTATGG CAACTCACCG CAATCAAGTA CAGGGCACAC TGGTACGCGG GATCCTCCCT
CAACAAGAAG ATCAAGTGCT TGATATCCAC GGCAAGATGG TAGCAGGCAG CTTAGATGCT
CTACGACCCG GAAGCTTCCA AATCGTATTG GGCATGGATT TGGCCCGCAC CCTAGGGGTT
TTTATCGGCG ATAAGATTAC CCTGGTTACC CCTCACGCAA CCACCACGCC AGCGGGAATT
ATCCCTCGTC TTAAGCGAGT CACAGTGGCA GGAGTTTTCC AAGTGGGGAT GTACGAGTAT
GATAGCGCCC TTGCCATCAT GAACCTAGAG GATGCGGCGG TTCTCTTTCG CATTCCGGGA
AAAGTCAGCG GACTTCGACT TAAGCTCGAC GATTTATTTA GCGCCCCCCG CCTCGCCCGC
GAACTGCGCG AAACTTTACC CGGCAACTAC CGAACAGCGG ACTGGACCTA CCAACATGCC
AATTTTTTTC GCGCCTTGAA AACGGAAAAA ACAGTCATGT TTGTCATTTT ATTTCTGATT
GTCGCGGTAG CCGCCTTTAA CATTGTCTCC ACCTTGGTCA TGGTGGTGAC GGATAAACAA
GCCGATATCG CCATTTTGCG CACCTTAGGG GCGACTCCAG CAAGTATTAT GGGAATCTTT
ATGGTTCAAG GCACGGTTAT TGGCTTTATC GGCACCATTT TGGGCATGAT AGGGGGGATT
ACCCTAGCGT TTAATGTAGA AACGGTAGTG CCCCAAATTG AAGCCTTGTT TGGCGTCCAA
TTCTTACCCG CAGATGTCTA TTACATCAGC GAACTTCCCT CGGAACTGAA TTGGGATGAT
GTCATTACCA TTTGCAGCAC GGCTTTCCTG CTCTGCCTTC TGGTAACCCT CTACCCCGCT
TGGCAAGCCG CCCGCACCCA CCCTGCCGAG GCCCTGCGCT ATGAATAA
 
Protein sequence
MFKPLPLYIG LRYTRAKRRN YFISFISLTS MLGVALGVAA LITVLSVMNG FEKELRTRIL 
GMVAHVIVTG PDGTLEHWQA LKTQLEENAK IAGIAPFIEG QGMATHRNQV QGTLVRGILP
QQEDQVLDIH GKMVAGSLDA LRPGSFQIVL GMDLARTLGV FIGDKITLVT PHATTTPAGI
IPRLKRVTVA GVFQVGMYEY DSALAIMNLE DAAVLFRIPG KVSGLRLKLD DLFSAPRLAR
ELRETLPGNY RTADWTYQHA NFFRALKTEK TVMFVILFLI VAVAAFNIVS TLVMVVTDKQ
ADIAILRTLG ATPASIMGIF MVQGTVIGFI GTILGMIGGI TLAFNVETVV PQIEALFGVQ
FLPADVYYIS ELPSELNWDD VITICSTAFL LCLLVTLYPA WQAARTHPAE ALRYE