Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2666 |
Symbol | |
ID | 3705163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3021589 |
End bp | 3023118 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637739147 |
Product | threonine dehydratase |
Protein accession | YP_344649 |
Protein GI | 77166124 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTACA GCTATCTAGA ACGCATTCTC AAGGCCCGTG TTTATGAAAT TGCCAAGGAA ACTCCGCTGG AATCCATGGG GCGTCTTTCT GGGCGATTGC AAAACGCCGT ATTGCTAAAG CGGGAAGATC TGCAACCCGT TTTTTCCTTT AAGTTGCGGG GAGCTCATAA CAAACTCCTC CAGTTATCGG AGGAGGCACG TCAGCGAGGG GTGATTGCCG CTTCGGCGGG CAACCATGCT CAAGGCGTTG CGCTTTCCGC CCGCAAGCTG GGGATAAGCG CCCGGATTGT GATGCCTCGG ACAACACCGC CAATCAAAAT TGAAGCAGTG CGTGATCTGG GTGCCGAGAT CGATTTGGTG GGCAATACTT ACGATGAAGC CTACCAATAT GCGCTGGCTT TGGCTGAAAA GCAGGTGTGT ACTTTTATCC ATCCCTATGA CGATCCTGAA GTTATTGCTG GCCAAGGAAC CGTAGCGATG GAGATTCTGC GCCAATACCC AGAGCCGTTG CATGCCATAT TTGTACCTGT AGGTGGCGGT GGGCTTATTG CCGGGGTGGC TGCCTATGTT AAAGCTCTTT CGCCGGAAAT CCGTGTTATT GGGGTGGAGC CCGACGATGC ATCTAGTCTT TATCAGGCTC TGCAAGTAGG AGAGCGGGTA GTACTTGATC AGGTGGGTAT TTTTGCGGAT GGCGCCGCAG TTCGCCAGGT AGGCAAAGAA CCCTTCCGCA TTGCGCGGGA AGCCGTGGAT GAAGTGCTGT TGGTGGATAG TGATGCCATT TGCGCCGCCA TCATGGATAT TTTCGAGGAT ACCCGTTCTA TCGCTGAGCC GGCAGGGGCT TTGGCTGTTG CCGGGTTAAA GCAGTATGTG GAGCGGGAAG GACTCCGGGG ACAGAGTTTG GTAGCCATTG ACAGTGGGGC CAATATCAAT TTTGACCGGC TGCGCCATGT GGCCGAGCGG GCTGAATTAG GTGAGCGGCG GGAGGCTTTG TTTTGTGTCA CAATCCCCGA GCAGCGGGGC AGTTTTCTTG CTTTTTGCGA GGCCATTGGT AAACGGGGCA TTACCGAGTT TAATTACCGC TATGGCGATT CCGGTGAGGC CCATGTGTTT GTGGGAATTC AGACGCGCAA CGGCAGTCAT GTCAAGGATC AGTTACTCCA TGATCTTCAC CAGAAGGGCT ATTCCGTGGT GGATATGAGC GATAACGAAA TGGCCAAACT CCACGTGCGT TATATGGTAG GCGGACAAGC ATCAAAGTTA AAGGATGAGG TCCTTTACCG GTTTGAATTT CCCGAGCGTC CAGGTGCTCT ACTGCGTTTT TTAACTCATA TGGGTAGCCG TTGGAATATT AGTCTGTTCC ACTACCGTAA CCATGGGGCA GCTTATGGCC GGGTATTGGC AGGCATTCAA GTGCCTCCCG CCGAAAAAAT AGAATTTCAG ATTTTTTTGG ATGAACTTGC CTATACCTGC CAGGAGGAGA CCGATAATCC CGCTTACCGG TTATTTCTTG GTCCGCCATC CGCCTCGTGA
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Protein sequence | MLYSYLERIL KARVYEIAKE TPLESMGRLS GRLQNAVLLK REDLQPVFSF KLRGAHNKLL QLSEEARQRG VIAASAGNHA QGVALSARKL GISARIVMPR TTPPIKIEAV RDLGAEIDLV GNTYDEAYQY ALALAEKQVC TFIHPYDDPE VIAGQGTVAM EILRQYPEPL HAIFVPVGGG GLIAGVAAYV KALSPEIRVI GVEPDDASSL YQALQVGERV VLDQVGIFAD GAAVRQVGKE PFRIAREAVD EVLLVDSDAI CAAIMDIFED TRSIAEPAGA LAVAGLKQYV EREGLRGQSL VAIDSGANIN FDRLRHVAER AELGERREAL FCVTIPEQRG SFLAFCEAIG KRGITEFNYR YGDSGEAHVF VGIQTRNGSH VKDQLLHDLH QKGYSVVDMS DNEMAKLHVR YMVGGQASKL KDEVLYRFEF PERPGALLRF LTHMGSRWNI SLFHYRNHGA AYGRVLAGIQ VPPAEKIEFQ IFLDELAYTC QEETDNPAYR LFLGPPSAS
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