Gene Noc_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2660 
Symbol 
ID3705157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3015102 
End bp3015449 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID637739141 
ProductIojap-related protein 
Protein accessionYP_344643 
Protein GI77166118 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00250929 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTG TAGAACTTAA AGAATTCGTG GTGAGCGCCC TAGAAGCGTT AAAGGGGCAT 
GATATCCAGG TTTTAGACGT GCGGAAACTT ACCACGGTAG CTGATTACAT GGTGATTGCC
AGTGGGACTT CTAATCGCCA AGTGAAGGCT TTAGCCAATG AAGTTATCGA AAGATGTGAA
GCGGCAGGGT ATCGAACTTT AGGCGTGGAG GGCGAGTCCT ATGGAGAATG GGTATTGGTG
GATATGGGGG ACGTGGTCGC CCATATTATG TTACCTCAGG TACGGGCCTT TTATAATCTA
GAGAAGCTTT GGAATATTCC TTCCGCTCAG GGAGTTAAAG AGCAGTAG
 
Protein sequence
MSTVELKEFV VSALEALKGH DIQVLDVRKL TTVADYMVIA SGTSNRQVKA LANEVIERCE 
AAGYRTLGVE GESYGEWVLV DMGDVVAHIM LPQVRAFYNL EKLWNIPSAQ GVKEQ