| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2648 |
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| Symbol | |
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| ID | 3704402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3001673 |
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| End bp | 3002488 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637739129 |
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| Product | DNA-formamidopyrimidine glycosylase |
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| Protein accession | YP_344631 |
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| Protein GI | 77166106 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00588455 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAAC TGCCAGAGGT CGAAACCGTT CGTCGTGGCA TCGAGCCGCA CCTAGTAGGC
CGCCAAATAC ATACGGTTAT TGTCCGAGAA TCGCGTCTAC GCTGGCCAAT TCCGCTCTCC
TTAACCCAGA ATCTTATTGG CCAGTCCTTT CTTGCTGTAG GACGCCGTGG CAAATACCTC
CTTTTAAGTT GTACTCAGGG TACGATTATT CTTCACCTCG GTATGTCTGG CAGTCTACGT
CTGGTCACTA CTAATACACC ACATGGAAAG CATGATCATC TTGATATCGT ATTGAATAAT
GGCCGCTGTT TGCGTTTCAA TGATCCCCGC CGATTTGGAT CAGTATCCTG GACTCAGGCA
AACCCCCTGC ATCACCCCCT GCTGGAGATA CTTGGTCCAG AACCCTTAGA ATCCCTGTTT
GATGGACATT ATCTTTTTAA ACACTCCCGT CATAGGCGAA CCTCGGTTAA AGCCTTTATC
ATGAACCACC GAATAGTCGC CGGAGTTGGA AATATTTATG CCAACGAGGC GCTGTTTCTG
GCAGGAATTC ACCCTCGGCG ATCTGCTAGC CGCATCGGTT TAGCCCGTTA CCAACGGCTA
GCAGAAACCA CTAAAACAGT GCTATACAAC GCAATTCAGG CGGGGGGAAC CACATTGCGG
AATTTTTTAA CTAGCGATGG CAAACCCGGC TATTTCGCTA ACCAGCTCCA AATCTATGGC
CGTAGCGCTC ATCCTTGTCC GATTTGTGGA ACTCCTATTC GCCTCGAACG CATCGGCCAA
CGGGCAAGCT ATTACTGCAC CCAATGCCAG CATTGA
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| Protein sequence | MPELPEVETV RRGIEPHLVG RQIHTVIVRE SRLRWPIPLS LTQNLIGQSF LAVGRRGKYL
LLSCTQGTII LHLGMSGSLR LVTTNTPHGK HDHLDIVLNN GRCLRFNDPR RFGSVSWTQA
NPLHHPLLEI LGPEPLESLF DGHYLFKHSR HRRTSVKAFI MNHRIVAGVG NIYANEALFL
AGIHPRRSAS RIGLARYQRL AETTKTVLYN AIQAGGTTLR NFLTSDGKPG YFANQLQIYG
RSAHPCPICG TPIRLERIGQ RASYYCTQCQ H
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