Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2590 |
Symbol | |
ID | 3704672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2944027 |
End bp | 2944299 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637739070 |
Product | host factor Hfq |
Protein accession | YP_344573 |
Protein GI | 77166048 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.104665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGTG GGCAGTCGTT ACAAGACCCA TTCCTTAATG CTTTGCGTAA GGAGCGAGTT CCAGTCTCGA TTTATCTTGT TAATGGAATT AAACTACAGG GACAGATTGA ATCTTTTGAT CAATTTGTTG TCCTGTTGAA AAATTCCGTT AGCCAGATGG TATATAAACA TGCTATCTCT ACTGTTGTTC CCGCGCGCAA CGTTAAATTA TCTAGCAACG AGGGAGAGAA TATTCATCCT ATTGGAGGGA CGCGTTCTGC TGATGCCGAT TAG
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Protein sequence | MSRGQSLQDP FLNALRKERV PVSIYLVNGI KLQGQIESFD QFVVLLKNSV SQMVYKHAIS TVVPARNVKL SSNEGENIHP IGGTRSADAD
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