| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2575 |
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| Symbol | |
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| ID | 3704579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2929403 |
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| End bp | 2930251 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637739055 |
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| Product | quinate/shikimate 5-dehydrogenase |
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| Protein accession | YP_344558 |
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| Protein GI | 77166033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.303834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGACC GTTACGCCGT CATGGGCAAT CCTATTGCTC ATAGCAAATC ACCTCAAATT
CATACCGCTT TTGCTCAGCA AACAGGCCAA GCACTCACCT ATACGGGGCT CCAGGTAGAA
GCTGGCAAGC TAGCAGAAGC CATCACTGCA TTCCAGCAGC AAGAGGGTAA AGGATTAAAT
ATTACCATTC CCTTGAAAGC TGAAGCCTGG AGGTTGGTAG ATCAATGCAG CCCTCAAGCG
CAGCGGGCCA AGGCGGTAAA TACCATTCTC TTAGAAAAGA ACGGAGCACT CCTAGGTGAT
AATACCGATG GCGTAGGATT GGTACGGGAT CTTATTAATA ACCACGGAGG CCGCATTACC
GGGCAGCAAG TTCTGCTGCT TGGGGCTGGC GGCGCAGCTT CTGGCGTTAT AGAAGCATTA
CTGAAAGAAC ACCCTTCCCA CCTTATTATC GTTAACCGCA CTCCGGCCAA AGCTATTGAG
CTAGCAGCTC GATTTAGCCC GTTTGGGGCA ATTACCGGCG GCGGCTATGA ACTACTTGAA
AATAATTCTT TCCATCTCAT TATTAATGCT ACCGCTAGTA GCCTTCAAGG CGAACTCCCG
CCCCTTCCCA GAGGGATATT GCGTTCTGGT GGCTGGGTTT ACGATATGAT GTATGGCAAT
GAACCCACCA TTTTCATGAA ATGGGGCCAA ACTCACGGGG CGGCACGGTC ACTAGATGGA
TTAGGAATGC TAGTAGAACA AGCTGCGGAA GCGTTTTTCA TTTGGCGTAA GGTACGCCCG
AAATCAGCGC CGATTATTGC ACAATTGAGG CGGGAAATGG ACATTAAAAA CCCCGCGATG
CCGCTGTGA
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| Protein sequence | MPDRYAVMGN PIAHSKSPQI HTAFAQQTGQ ALTYTGLQVE AGKLAEAITA FQQQEGKGLN
ITIPLKAEAW RLVDQCSPQA QRAKAVNTIL LEKNGALLGD NTDGVGLVRD LINNHGGRIT
GQQVLLLGAG GAASGVIEAL LKEHPSHLII VNRTPAKAIE LAARFSPFGA ITGGGYELLE
NNSFHLIINA TASSLQGELP PLPRGILRSG GWVYDMMYGN EPTIFMKWGQ THGAARSLDG
LGMLVEQAAE AFFIWRKVRP KSAPIIAQLR REMDIKNPAM PL
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