Gene Noc_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2573 
Symbol 
ID3704577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2927036 
End bp2928181 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content51% 
IMG OID637739053 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_344556 
Protein GI77166031 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.219854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCCCTG AAGCCCTACT TGCCCTCGAA GATGGTAGTG TATTTCGAGG TACCGCTATT 
GGCTGCCACG GGCAGACAGT AGGCGAAGTC GTATTTAATA CTGCTATGAC GGGATACCAA
GAAATTCTGA CGGATCCCTC CTATTGCCAG CAGATTGTTA CTTTGACCTA TCCTCACGTT
GGAAATGTAG GCACTAACAG TGAAGATCAG GAATCGGATC GAGTTTATGC CAGTGGCCTG
GCTATTCGTG ATTATTCCTT TGCTGTTAGT AATTGGCGGG CGCGAGAACC CCTAGATGCT
TTTTTAGCTA GGCATCAGGT GGTGGCTATT GCCGATATTG ATACCCGCAG GCTTACCCGC
CGCTTGCGCC AGCACGGTGC GCTCAATGGC TGCATCATGG CCGGTGGGGG CCTTGATGAG
GCGGAGGCGC TAGCACAGGC GCGGGCGTTT CCAGGTCTCA AGGGTATGGA TCTTGCTCAA
GTGGTGACTA CGGATGCTTC CTATGGTTGG TCCGAGGGAA GCTGGCGCTT GGAGCAAAAA
GCCTTTGCTG CTGGTGAAAA GGTTAAAGAG CGGTTTCATG TCGTAGTCTA TGATTTTGGT
GTTAAACGTA ATATTTTACG GATGCTGGTG GATCGGGGAT GCCGGGTCAC AGTGGTGCCC
GCCAGGACTT CCGCCAAGGA AGCACTGAAT TTGTCTCCGG ATGGAATAGT GCTTTCTAAT
GGCCCTGGCG ATCCGGATCC CTGCGGTTAC GCCATTACGG CGATTCAGGA GTTTTTGGCT
CGGCCCATAC CGTTATTTGG TATCTGTCTG GGCCATCAAT TACTTGCCCT CGCTAGTGGG
GCCACAACGG TAAAGATGAA ATTTGGTCAC CATGGCGCCA ACCATCCGGT ACAGGATCTG
GCAACTGGGG AAGTACTTAT CACCAGTCAA AATCATGGTT TTGCGGTTAA TGAAAAAACT
TTACCCCCGT GCCTAAAACC TACCCATCGT TCTCTGTTCG ACGGTACCTT GCAAGGTATC
CAGGATAGGG ATAAGCTAGT CCTTGGTTTT CAGGGACATC CTGAGGCCAG CCCTGGCCCG
CGTGATATAG CCCCATTATT TGACCGTTTT ATTACTCTGA TGCAAAAAGC CCATACCCAG
CAATAG
 
Protein sequence
MRPEALLALE DGSVFRGTAI GCHGQTVGEV VFNTAMTGYQ EILTDPSYCQ QIVTLTYPHV 
GNVGTNSEDQ ESDRVYASGL AIRDYSFAVS NWRAREPLDA FLARHQVVAI ADIDTRRLTR
RLRQHGALNG CIMAGGGLDE AEALAQARAF PGLKGMDLAQ VVTTDASYGW SEGSWRLEQK
AFAAGEKVKE RFHVVVYDFG VKRNILRMLV DRGCRVTVVP ARTSAKEALN LSPDGIVLSN
GPGDPDPCGY AITAIQEFLA RPIPLFGICL GHQLLALASG ATTVKMKFGH HGANHPVQDL
ATGEVLITSQ NHGFAVNEKT LPPCLKPTHR SLFDGTLQGI QDRDKLVLGF QGHPEASPGP
RDIAPLFDRF ITLMQKAHTQ Q