| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2554 |
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| Symbol | |
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| ID | 3704557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2905281 |
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| End bp | 2907233 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637739033 |
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| Product | NADH-plastoquinone oxidoreductase, chain 5 |
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| Protein accession | YP_344537 |
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| Protein GI | 77166012 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTCC AGACTCTTGG AATTGTGTTT GCGCCCCTGA TCGGCAGCCT CATTGCTGGC
TTGTTTGGAA AGAAGATTGG GCGCCTCTGG TCCCATCGAG CTGCTATTGC CGGGGTAAGC
ATTGCATTTT TGTTATCTCT CATGGTGTTT AAGCAAGTGG TGGTGGATGG AGTCATCTAT
AATGAGGCCG TCTACACTTG GGTCGCTGTT GGCGATTTAC GCGTGGAAAT CGGTTTTCTT
ATTGATCGTT TAAGCGCGCT AATGATGGTA GTGGTGACCT TTGTTTCCCT AATGGTACAT
ATTTATACCA TCGGCTATAT GGCGGATGAT CCTGGCTATC AGCGTTTTTT TAGCTATATC
GCTCTTTTCA CTTTTTCCAT GCTGATGTTG GTCATGGCAA ATAATTTCCT CCAATTGTTT
TTTGGATGGG AAGCCGTGGG CTTGGTGTCC TACCTATTGA TAGGTTTTTG GTATAAGCGG
GAATCCGCCA TTTATGCCAG TCTTAAAGCC TTTTTAGTTA ACCGGATTGG TGATATAGGT
TTTTTGCTGG GGATCGCCTG CGTATTAATG TATACGGGGA GCCTGGATTA TGTAGAGGTA
TTTACAGTGG TGCCTACGCT GACGGAGGAA ACACTTTCTG TTTGGCCAGG AACCGCTTGG
TCGGTGCTTA CGGTGATAGG AATTTTACTC TTCATTGGTG CTATGGGTAA ATCGGCGCAA
GCACCCTTGC ATGTGTGGTT GCCGGATTCC ATGGAAGGCC CGACCCCGAT TTCCGCTCTT
ATTCACGCGG CAACCATGGT GACTGCAGGT ATTTTTATGG TCGCCCGGAT GTCGCCGATC
TATGAGCTGT CCGAAATTGC TCTGAGCGTT ATTTTAGTCA TTGGCGCAAT TACCGCTTTC
TTTATGGGGC TGATAGGTAT TGTCCAGAAT GACATCAAGC GAGTAATCGC CTATTCCACC
TTGTCACAGT TAGGATATAT GACGGTGGCG CTTGGGGTTT CCGCCTATGC GGCGGGAATC
TTTCATCTCA TGACTCACGC CTTTTTCAAG GCGTTGCTTT TCCTGGGGGC GGGATCAGTG
ATTATCGCGA TGCACCACGA GCAAGATATG CGTAAGATGG GTGGGCTAAA AAAATATATG
CCTGTCACCT ACTGGACTGC AATAATAGGT GCGTTAGCGC TAATTGGTTT TCCTGGGTTT
TCTGGATTTT TTTCCAAAGA CTCCATTATC GAAGCTGTTC ACGCTTCTCA ACTTCCCGGT
GCGGGCTTTG CTTACGCGAT GGTTGTTTCC GGCGTATTTG TTACAGCCTT TTATACCTTT
CGAATGTTGT TTCTCACATT TCACGGGGAG GAACGGATGG ATCAGCATAC CCGCGCACAC
TTAAAAGAGT CTCCAGCGGT AGTGACCGTG CCTTTGGTGT TATTGGCTAT CCCTTCGGTA
GTGGCTGGTA TTTTTATTGA ACCAATTTTG TTTGGTGGTT TTTTTGGCGA GGCAGTTATG
GTTTCTCCAG CTCATAATGT GCTGGCAGCG GTAAGCGCTG ATTTTCATGG AGCGATGGCT
TTTGCCTTGC ATGGCTTTCA GGGGCTTCCT TTCATACTGG CTATGGTGGG GGTCGTAGCA
GCTTGGTATT TATATCTCAA GCGTCCTCAG CTGCCAAAGC AATTGCGGAG CCGTTTTGGC
TTGCTTTATT GGGCCTTGAG TAACAAATAT GGGTTTGATC GTTTCAATGA AATTTTCTTT
GCGGGTGGAG CGCGCCAGGC AGGCAGGTTG CTTTCACAGC TTGGGGATCG AATGCTGATT
GACGGTTTTT TCGTCAATGG AACGGCACGG GTAGTCGGCG TAATCGCTCA AATCACCCGT
TATTTGCAGT CCGGTTATCT TTTTCATTAT GCCTTTGCCA TGATTTTAGG GCTGCTTTTT
CTTATCGGCA GTTTCGTCAT TTACGGGGGC TAA
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| Protein sequence | MEVQTLGIVF APLIGSLIAG LFGKKIGRLW SHRAAIAGVS IAFLLSLMVF KQVVVDGVIY
NEAVYTWVAV GDLRVEIGFL IDRLSALMMV VVTFVSLMVH IYTIGYMADD PGYQRFFSYI
ALFTFSMLML VMANNFLQLF FGWEAVGLVS YLLIGFWYKR ESAIYASLKA FLVNRIGDIG
FLLGIACVLM YTGSLDYVEV FTVVPTLTEE TLSVWPGTAW SVLTVIGILL FIGAMGKSAQ
APLHVWLPDS MEGPTPISAL IHAATMVTAG IFMVARMSPI YELSEIALSV ILVIGAITAF
FMGLIGIVQN DIKRVIAYST LSQLGYMTVA LGVSAYAAGI FHLMTHAFFK ALLFLGAGSV
IIAMHHEQDM RKMGGLKKYM PVTYWTAIIG ALALIGFPGF SGFFSKDSII EAVHASQLPG
AGFAYAMVVS GVFVTAFYTF RMLFLTFHGE ERMDQHTRAH LKESPAVVTV PLVLLAIPSV
VAGIFIEPIL FGGFFGEAVM VSPAHNVLAA VSADFHGAMA FALHGFQGLP FILAMVGVVA
AWYLYLKRPQ LPKQLRSRFG LLYWALSNKY GFDRFNEIFF AGGARQAGRL LSQLGDRMLI
DGFFVNGTAR VVGVIAQITR YLQSGYLFHY AFAMILGLLF LIGSFVIYGG
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