| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2533 |
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| Symbol | |
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| ID | 3704689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2885728 |
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| End bp | 2887071 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637739012 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_344516 |
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| Protein GI | 77165991 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000103349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGC ACAAGCGCCA AGCGCCGCAG CCGCCGCTTC CTCCCCTTGG CCTGAAGCCG
CTCCTGGCGC TTGCTATTCC CAGCGCTGTT TTCACTTTGC TCACCAACGG TTTTCGGATC
GTTGATCAAT ATTTTATTCA AGATGTGTCC GTCGAAGCGC AAGCCGCCAT TGGCTCGTCC
GTCTTCGTGG TTATTTTTAT CTATGCCACT TTTGAATTGC TGGCAGCAGG GGCGGGGCCC
CTTATCGCCC GGGCAACTGG CGCCCACGAT CCGATAGCCC GCCGGGCGCT GCTTGGCGAA
GCTCTCTTCG GCGCTCTCCT CCTGACCATG CTGCTAATGG TCATTGGCAC CCTGGGAGCA
CCGCTGTTTA CCCGCGCCTT GGGTCTTGAA GGCCAAGCGG CCAGTGAGTC CAATCGTTAT
TTGTGCACCC TTTTTTTAAC CGTGCTGCCC TTGGTGCTGA CGCCCTTAAT CGATCAGGCG
TTTATCAATA TGGGTTCGGC CCGGCCGCCG TTAATTCTCC ATGCCCTCTC CCTGAGCCTG
AATATTATTT TGACCCCCCT CCTCATCCAT AGCGCGGGGC TTGGCATTGT AGGAGCTGCC
TTGGCCTCTA ATCTCGCCCG TGGTATTAGC GTTGGCTTGG GACTCCTGCT GCTCAAAAGG
ATAACAGGAT TAACCCTAAA AGACCTCAAG CCCCGCGGGC AACTGCGCCG GATTTTACGG
ATCGGCGCCC CCATGGCTTT AGGAACGGCC TTTTTCGCCA TGGTCTATTG GGCACTGCTG
AAAACCTCCG TTTCACCCCT GGGGGCCCAT GCCAACGCCG CCCTGGGAAT TGGATTTTCC
GCCCTTGAAG GATGCACCTG GCCACTCTTC CACGGACTCT CTCTTGGCGC CGCTTCTCTT
GCTGGCCGCT ACCTGGGAGC CCAGCGGCCC GATTTGGCCC GCCAAACCTT TTACATGGCC
CTACCCTTCG CGACCCTTCT GGGCCTCGCG GCATCCCTAA CATTTTTCTT TGCTGGCGAA
GCGCTCACTG GCCTTTTTAC CGATGACCGG GCTGTCCATC AGGCGGCAAC GGAATATGCG
GTAATTCTCG CCGCCTCTCA GCTTTTTCTC GCCTGGGAAG CCTTAAGTAC CGGCATTTTG
GCCGGCGCCG GTGATACCCG GACGGTATTT TGGTACAGCA CCCCTTTCAA CCTCCTCCGG
ATTCCCCTCG CCTGGTTACT CGCTTTCCCC CTGGGTTTTG GCGCCCCTGG GATTTGGTGG
GCGATTAATC TCACCACCTA TGCCAAAGCG ATTTGCAAGG GGTGGGCGGT ATGGCGAGGA
CGCTGGGCCA CTATCGAGCC TTGA
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| Protein sequence | MAKHKRQAPQ PPLPPLGLKP LLALAIPSAV FTLLTNGFRI VDQYFIQDVS VEAQAAIGSS
VFVVIFIYAT FELLAAGAGP LIARATGAHD PIARRALLGE ALFGALLLTM LLMVIGTLGA
PLFTRALGLE GQAASESNRY LCTLFLTVLP LVLTPLIDQA FINMGSARPP LILHALSLSL
NIILTPLLIH SAGLGIVGAA LASNLARGIS VGLGLLLLKR ITGLTLKDLK PRGQLRRILR
IGAPMALGTA FFAMVYWALL KTSVSPLGAH ANAALGIGFS ALEGCTWPLF HGLSLGAASL
AGRYLGAQRP DLARQTFYMA LPFATLLGLA ASLTFFFAGE ALTGLFTDDR AVHQAATEYA
VILAASQLFL AWEALSTGIL AGAGDTRTVF WYSTPFNLLR IPLAWLLAFP LGFGAPGIWW
AINLTTYAKA ICKGWAVWRG RWATIEP
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