Gene Noc_2519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2519 
Symbol 
ID3704714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2867862 
End bp2868356 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content48% 
IMG OID637738998 
Productacetolactate synthase small subunit 
Protein accessionYP_344502 
Protein GI77165977 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATA TCATTTCTTT ACTCATGGAA AATGAATCCG GGGCTCTGTC TCGGGTTGCA 
GGTTTGTTTT CTGCACGGGG CTATAATATC GAGTCCCTGA CTGTGGCGCC CACGGAAGAT
CCTTCCTTGT CCCGTATGAC TTTGGTTACC ACTGGTTCGG ATGAGATCAT CGAGCAAATC
TTGAAGCAGT TAAATAAGCT GGTTGATGTG GTTAAGTTAG AGGATCTTAC CGAGGGAGCG
CATATTGAGC GGGAGTTGAT GCTGATCAAA GTGGCGGCTA CTTCGGCGGC TGAAAGGGAT
GAGGTTAAAC GTTTAAGTGA TATTTTCCGT GGCCGCATCA TTGATGTTGC CGATAGTACT
TATACTATAG AGCTCACGGG TAGTGGTAAT AAACAGGACG CCTTTATCCA GGTGCTTAAG
GAGTTCCAAA TCTTGGAAAC CGTCCGTTCT GGAGCGATGG GAATTGCCCG TGGCGTAAAA
GGGTTGCAAC TCTAG
 
Protein sequence
MRHIISLLME NESGALSRVA GLFSARGYNI ESLTVAPTED PSLSRMTLVT TGSDEIIEQI 
LKQLNKLVDV VKLEDLTEGA HIERELMLIK VAATSAAERD EVKRLSDIFR GRIIDVADST
YTIELTGSGN KQDAFIQVLK EFQILETVRS GAMGIARGVK GLQL