| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2513 |
|---|
| Symbol | |
|---|
| ID | 3704708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2861383 |
|---|
| End bp | 2862657 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637738992 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_344496 |
|---|
| Protein GI | 77165971 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3174] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.196056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCC TTGAACAACT GGGGCTAGCG CTTGCGCTAG GGTTGCTGGT AGGTTTGGAA
CGGGGATGGC AAGAGCGTCA TGCGGAGGAA GGTGCCCGTA TCGCTGGCTT GCGTACCTTT
GGACTGATTA GCCTGCTGGG GGGGCTGTGG GCTTTATTGT CCGAGCAGTT TGGAGCAGTT
CTCCTGGGAT TTGCTTTTTT AACTTTTGTT TTACTGGTCC TGGTTTCCCA TTTTGACAGC
GTAAAGCGGA GCGGAGCCCG TGGTTTGACC ACAGTGGTCG CTACTTTGGT GACTTTTACC
TTGGGTGCTT TGACTGTTGC GGGTTATGAG GTGGTCGCTT CGGCAGCGGC GGTTGTGGTG
ACTGTATTAT TAGGCCTTAA ACCCGTTTTA CACGCCTGGT TGGCTCGGCT GCGCCAGGAA
GAACTCTACG CTGTCTATAA ACTCCTGCTT ATTTCCGTAG TGCTGCTGCC CGTGTTGCCT
AACCAAGGTT TTGGCCCGTG GCAAATTCTC AACCCCTATG AGATTTGGTG GATGGTGGTT
CTGATTGCGG GGGTGTCTTT CATTGGCTAT TTCGCAGTCC GCATTGCGGG AACGGGACGG
GGAATATTGT TGACTGCACT ATCTGCCGGA CTGGTTTCCT CGACGGCTTT GACTTTGCAT
TTTTCTCGAA TTGCCCGTGC TAATCCTCGA GGCCAGCGTT TACTTAGCGC GGGAATTGCA
TTTGCCGCCG CCACCATGTT TCCGCGGCTC TTATTGGTGG TGGGCATTAT CCACCCTTCC
ATGGCGCTTT ATTTACTTTT CCCCGCTGGT TTGATGGGTA TCATCGTTTA CGGGGGAGGG
TACTGGCTTT GGCGGGGTGC TAAGCGCCAA TCTACACCCC ATCTAGTGCT AGATAATCCT
TGCGATCTGG GGATGGCGGT AAAATTTGGT GGCTTGTTGG CATTAGTTAT CTTGGCTGCT
CATGCGCTAA AGGAGTGGTT TGGAGAGATT GGGCTGTATG TAGCAGCGGG AATCTCGGGT
ATTAGCGACG TTGATGCTAT CTCCCTTACC CTAGCACGGA TGGCCCAAGA GGATAGCCAA
GTCTTGGCTG TTGCCGCCAT AGGGATTTTC CTGGCCGCTA TGGTGAACAC GCTGGTTAAA
GGGGGGTTGG CCTGGGGGAT AGGCGGAAGC CGTTTTGGGC TGCCTCTTCT AGGAATTTTT
TTACTCTCGA TCGTGGTGGG AGGCGGTAGC CTGTTGATGT GGAGCGGTAA TTTCCCCAGC
CTGGAGCTAG TCTAA
|
|---|
| Protein sequence | MALLEQLGLA LALGLLVGLE RGWQERHAEE GARIAGLRTF GLISLLGGLW ALLSEQFGAV
LLGFAFLTFV LLVLVSHFDS VKRSGARGLT TVVATLVTFT LGALTVAGYE VVASAAAVVV
TVLLGLKPVL HAWLARLRQE ELYAVYKLLL ISVVLLPVLP NQGFGPWQIL NPYEIWWMVV
LIAGVSFIGY FAVRIAGTGR GILLTALSAG LVSSTALTLH FSRIARANPR GQRLLSAGIA
FAAATMFPRL LLVVGIIHPS MALYLLFPAG LMGIIVYGGG YWLWRGAKRQ STPHLVLDNP
CDLGMAVKFG GLLALVILAA HALKEWFGEI GLYVAAGISG ISDVDAISLT LARMAQEDSQ
VLAVAAIGIF LAAMVNTLVK GGLAWGIGGS RFGLPLLGIF LLSIVVGGGS LLMWSGNFPS
LELV
|
|---|
| |