Gene Noc_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2478 
Symbol 
ID3704616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2822455 
End bp2824437 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content51% 
IMG OID637738957 
Productasparagine synthase, glutamine-hydrolyzing 
Protein accessionYP_344461 
Protein GI77165936 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.669542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGGT TTGCAGGTTT TTATGATTCT TCGTTGCCGG TGGATCAGGC GGGAGAAATC 
CTCACTAAAA TGGCATCAGA GCTAATTCAT CGAGGGCCGG ATGACGAAGG AATCTGGTGC
GAACGGGAAA CGGGAATTCA TTTTACTCAT AGACGTTTAG CGGTGGTGGA TCTTTCCGCC
AGTGGCCATC AGCCCATGCT TTCTGCTAGT GGCCGTTACG TGATTGTCTT TAATGGGGAA
ATTTATAATT ATAAAGCACT GCGGACAGAG CTAGAAGGAA GAGAAACCCA GTGGCATGGC
TATTCGGATA CCGAGGTTTT GCTGGCGGGG ATTGAGGCGT GGGGAGTAAG CAAAACTCTG
CAGCGCTGTG TGGGCATGTT TGCCCTGGCC CTTTGGGATA GAAAGGCGCG GGTGCTTTAT
CTTGCTCGGG ACCGGCTGGG AGAAAAACCT TTATATTACG GTTGGATGAA GGGAGCTTTT
TTATTTGGTT CCGAACTCAA GGCGTTACGA GCCTATCCAT TCTGGCAGGG GGAGATAGAT
CGGAAAGCGG TAACGCTTTT GATGCGTCAT AATTACATCC CTAGCCCTTT TTCTATTTAC
CAAGGGATCT ATAAACTTCC GCCGGGATGT TTTTTAGCGT TAAGTTGGGA AAGTTTAAGG
GTAAATAAGG CGCTTGCCCC CTTTCCGCAA GAGGGAGAAA GGAGCGTTCT GCAACCTTAT
TGGTCCGCCT GGAAGGCAGT GGAAAACGGG GTGACAGTCC CTTTTAGGGG TAGTGATAAA
GAGGCCATCG CTGAACTGGA GAAGCGGCTA CGAGATGCTG TGGTAGGTAA GATGGTCGCT
GATGTTCCTC TGGGCGCCTT TCTCTCCGGG GGAATTGACT CTTCTACGGT TGCCGCCCTA
ATGCAAGCCC AAAGCAGCCA GCCCATTCGA ACTTTCTCTA TTGGTTTCCA CGAGGAGGGT
TATAATGAAG CGGTTCATGC CGCCCAAGTG GCCCATCATT TAGGCACGGA TCATACTGAA
CTCTATATCA GTCCGGAGGA AGCCATGGCC GTGATCCCAC GGCTTCCCAG CATCTACGAT
GAACCTTTTG CTGATTCCTC TCAGATTCCT ACTTTTCTGG TGTCCCAGTT GGCACGACGG
CATGTCACCG TGGCCCTGTC TGGAGATGGA GGCGATGAGC TGCTAGGCGG CTATAATCGC
TATTTCTGGT GCAAGCAGAT TTGGAATAAG GCAGGCAGGT TTCCCCGCCT CGGGCGTCAG
TTGGCTGCTC AAATGCTGGG GGCTCTCCCT CCTTCGGTTT GGGATAAGGT TTTTGCAAGT
CTGGACCCCA TCTTGCCAGC CCGATTCCGG CAGGCCCATC CGGGCGATAA ATTGCATAAG
CTAGCAGCCA TTTTGGCCTC GGACTCTCCA GCGGTTATTT ATGAGCAGCT GATTTCCCAG
TGGCAGAATC CTGGCAGCAT TGTTATTAAT GGTTTCGAGC CTTCGGGTTC AGCTAATAAA
GTTTGGTCCT ATCCTGCACT GACTAATCTT ACCGAACGGA TGATGTTCCT CGACCTAATA
ACCTATCTTC CCGGTGATAT CCTGACCAAA GTGGATCGGG CAAGTATGGC GGTGAGTTTA
GAAACCCGTG TTCCGCTGCT CGATCATCGC TTGGTGGAAT TTGCCTGGCG CCTACCGCTT
GGGTTGAAGG TACGGGCGGG GACAGGCAAG TGGATATTGC GTCAGGTTTT ATACCGTTAT
GTCCCTGAGG CATTGGTAGA ACGCCCAAAG ATGGGTTTCG GGGTTCCTAT TGACGCGTGG
TTACGGGGTC CGCTGCGCCA CTGGGCGGAA GATTTACTTG ATGCCAGCAA GCTTAGGAGA
GAAGGATATT TCTACCCTGA GCCTATCCGT AAAAAATGGC GGGAGCATCT CAGCGGGCGG
CGTAACTGGC AATATCCCCT GTGGTGCGTC TTGATGTTTC AAGCTTGGTT AGATGCTCAG
TAA
 
Protein sequence
MCGFAGFYDS SLPVDQAGEI LTKMASELIH RGPDDEGIWC ERETGIHFTH RRLAVVDLSA 
SGHQPMLSAS GRYVIVFNGE IYNYKALRTE LEGRETQWHG YSDTEVLLAG IEAWGVSKTL
QRCVGMFALA LWDRKARVLY LARDRLGEKP LYYGWMKGAF LFGSELKALR AYPFWQGEID
RKAVTLLMRH NYIPSPFSIY QGIYKLPPGC FLALSWESLR VNKALAPFPQ EGERSVLQPY
WSAWKAVENG VTVPFRGSDK EAIAELEKRL RDAVVGKMVA DVPLGAFLSG GIDSSTVAAL
MQAQSSQPIR TFSIGFHEEG YNEAVHAAQV AHHLGTDHTE LYISPEEAMA VIPRLPSIYD
EPFADSSQIP TFLVSQLARR HVTVALSGDG GDELLGGYNR YFWCKQIWNK AGRFPRLGRQ
LAAQMLGALP PSVWDKVFAS LDPILPARFR QAHPGDKLHK LAAILASDSP AVIYEQLISQ
WQNPGSIVIN GFEPSGSANK VWSYPALTNL TERMMFLDLI TYLPGDILTK VDRASMAVSL
ETRVPLLDHR LVEFAWRLPL GLKVRAGTGK WILRQVLYRY VPEALVERPK MGFGVPIDAW
LRGPLRHWAE DLLDASKLRR EGYFYPEPIR KKWREHLSGR RNWQYPLWCV LMFQAWLDAQ