Gene Noc_2365 details

Gene Information

• Locus tag: Noc_2365
• ID: 3704805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 2710354
• End bp: 2712387
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637738848
• Product: flagellar hook-associated protein 2
• Protein accession: YP_344353
• Protein GI: 77165828
• COG category: [N] Cell motility
• COG ID: [COG1345] Flagellar capping protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACTT CGACAGGTAT CGGTTCCGGG CTGGATGTGG AAAGCCTGGT GAACCAATTG 
GTGGCAGCGG AAGGGCGGCC CCAGCAATTG CGCCTCAACC GCCAGGAAGC AAAAATGCAA 
GCGACTCTTT CCGCCATGGG CACATTAAAG AGTGAGCTGG CAAGCTTCAA GGATGCGGTT 
TCAAAGCTTG ATTCGCCTTC GGCTTTTCAG GCCATCAAGG CCAGCGTTGG CAATAGGGAT 
TTATTGACTG CTTCGGCAGC GGCGAAAGCG GCCACTGGCA CCTACAGTGT CGAAGTTCAG 
CAATTAGCCC AGGCGCAAAA ACTCGCTTCC AAAGCCTTCG CCGATTCTAG CGCTGCCTTG 
GGGACGGGAA CCCTGAGTTT TCGTTTCGGT AGCTATGACA ATAACACCAA TACTTTTACC 
GGAAATCCTG ATAGAACCGC CCAAATCGTG ACTATTGATA GCGCCCATAA TAGTTTGAGC 
GGCATTCGGG ATGCGGTTAA TGAAGCCGAT ATCGGAGTCC AGGCTAACAT TATCAATGAT 
GGAACGGGGG ATCGCCTGGT TTTTACCGCT CAAACCATGG GTCTCGCTAA TAGCTTGGAA 
ATTACCGTAA GCGATGAGGA TGGCAATAAT CTGGATGAGA GTGGCCTGTC TCAATTGGCT 
TATGATCCGA CCGGAGCAGA TTCAGGGAGC GGGAAAAGTT TAACGGAGAC AGTAGCCGCT 
CAAGATGCCC GTCTAGTGGT CGATGGCTTG ACCGTTACTC GTCCCCAAAA CACGATTACC 
GGGATGATCG AGGGGGTAAC TTTAGAGCTC AACAGCGCTG AACTTGATTC CCCCACGACA 
CTTACGGTGG CGGCTGATGG GCACATAGCC AGCAAATCGG TGAATGGATT TGTAGAGGCT 
TTTAATAGTT TGGCGAAGAC CTTAAATTCT CTTTCTTCCT ATAATCCGGA AACTCAAGAA 
AAAGGCCCTC TGCTTGGGGA TGCAAGTTTA CGCGGAATAG AAAACCGCCT CCGGCGGGTT 
GCTAGCGATA CTGTTACCGG TCTGTCTGGC CCTTATCGAA CCTTAGCCGA TATTGGTATT 
ACCACCCAGC GGGATGGCAC CCTGAAACTG GATGAAAGCA AGCTGCAACA GGTGGTTGAA 
TCTGATCCCG AAGCGGTTGC CCGTTTATTT ACAGGAGGCG GCAGCAGCTC GGACCCGTTG 
GTGCGGTTTG TAGAAGCTAC CGATGAGGCC CAAGCCGGAG AATTTGCGGT CAACGTTACT 
CAGCCAGCAA CCCAGGGAAA ATATACGGGG AACGTCTTTT CTGGAAGCGG TTCACCCATC 
ACTATTGATG CTGATAATGA TGAATTTACC CTTAAGGTAG ATGGGGGGGA GGCCGTGATG 
ATTTCCTTGA CCCAGCAAAC CTATAATGAT GGGATGGCCC TTGCCCAGGA GATCCAAAGC 
CAAATTAACG TTAATCCCAC TCTAAGCGGG GCCGGAAGCC AAGTAACCAT TGAATTCATA 
AATGATCGCT TTGAAATTCG TTCTAGCCGT TATGGGAGTG GTTCTAACGT TGAAATCCTG 
GCACTGGATC CTTCGCCCTC GGAGACCACT ACCCAAACCT TGGGTCTGAC GGTTAAAAGC 
GGGAATGCGG GGGAAGATGT GGCTGGAACT ATCGGTGCTC AGGCGGCAAC AGGCTCGGGT 
CGCTTTCTAA CTGGAAGTGA TAGGGCAGAA GGTATTCGTC TGGAGATCCT GGGAGAAAGC 
TCGGGAGCGC GGGGGAGTAT CAGCTTTTCC CGGGGAGTAG CAGCCCATCT GAATACTTAT 
TTGGATCAAG TACTGGATTC GGAAGGATTC TTAGAAAATC GCATTGATGG CTTAAATCAT 
CGCATTGGTG ATTTCAGCGA GCAGCGGGAA GATTTGGTGC AGCGTTTGGA TGCTATTGAG 
AAGCGTTACC GGGCACAGTT TACGGTACTG GATAGTCTGC TTGGACAACT CCAAACAACG 
AGCAGTTTTT TAAGTCAGCA AATCGCTAAT TTACCCGGAA ATAGATCTGC CTAA 

 

Protein sequence

MITSTGIGSG LDVESLVNQL VAAEGRPQQL RLNRQEAKMQ ATLSAMGTLK SELASFKDAV 
SKLDSPSAFQ AIKASVGNRD LLTASAAAKA ATGTYSVEVQ QLAQAQKLAS KAFADSSAAL 
GTGTLSFRFG SYDNNTNTFT GNPDRTAQIV TIDSAHNSLS GIRDAVNEAD IGVQANIIND 
GTGDRLVFTA QTMGLANSLE ITVSDEDGNN LDESGLSQLA YDPTGADSGS GKSLTETVAA 
QDARLVVDGL TVTRPQNTIT GMIEGVTLEL NSAELDSPTT LTVAADGHIA SKSVNGFVEA 
FNSLAKTLNS LSSYNPETQE KGPLLGDASL RGIENRLRRV ASDTVTGLSG PYRTLADIGI 
TTQRDGTLKL DESKLQQVVE SDPEAVARLF TGGGSSSDPL VRFVEATDEA QAGEFAVNVT 
QPATQGKYTG NVFSGSGSPI TIDADNDEFT LKVDGGEAVM ISLTQQTYND GMALAQEIQS 
QINVNPTLSG AGSQVTIEFI NDRFEIRSSR YGSGSNVEIL ALDPSPSETT TQTLGLTVKS 
GNAGEDVAGT IGAQAATGSG RFLTGSDRAE GIRLEILGES SGARGSISFS RGVAAHLNTY 
LDQVLDSEGF LENRIDGLNH RIGDFSEQRE DLVQRLDAIE KRYRAQFTVL DSLLGQLQTT 
SSFLSQQIAN LPGNRSA