| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2359 |
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| Symbol | |
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| ID | 3704799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2703410 |
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| End bp | 2705113 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738842 |
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| Product | flagellar FliF M-ring protein |
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| Protein accession | YP_344347 |
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| Protein GI | 77165822 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA CTAACACTAG TAGTAATCCA CCTGCTGTTA CTTCGGAAGC ATTGCCGGTT
GCCAGTACGC GTTTAGCCGC ATTGCAAGCT AATATAGGCC GCTTGTCTTT ACAGAAGCAA
GTAGGGCTAT TGCTAGCCAT CGCCGCTAGC GTGGCGCTTG TGGTAGGCAT CTTTATGTGG
TCTTGGGCGC CTACTTACCA AGTTATGTAT GGTGCCGTGA CGGGCAAGGA GAAAGGGGAG
ATCGTTGCGG CACTGCAAAA GGCGAATATT GAATACCGGC TAGCGGAAAA TACCGGGGCA
ATTATGGTGC CGGCTTCCAA AGTGCATGAG GTGAGGCTGC AATTGGCGAT GGAAGGGTTA
CCGCGCAGTG CCGACACGGG TTTTGAACTC TTAGAGCAGA ATCCAGGTTT TGGCGCTAGT
GAGTTTCTGG AGAAGGCCCG TTATCAGCGG GCCTTGGAAG GGGAGTTGGC CCGGACCATC
GGTGCCTTGA ATAATGTTAG AAATGCTCGA GTCCATTTGG CGTTACCGAA GCAATCCGTT
TTTATCCGTA ATCGCAGAGC GCCTTCAGCT TCGGTAGTTT TGGATCTCTA TGCCGGACGC
ACGCTTGATC CCGGGCAAGT GGCCGCGATC ACCCACTTAG TTGCTTCCAG TATTCCCAAT
TTGGAGAGTA GTGGTGTAAC GTTGGTGGAT CAAAGAGGCA ATTTGCTGAC CCGGCAAGAC
CGTTCCCAAT CTCTGGGGAT GACAGAGGGC CAATTCGAGC ATACCCGGCG TTTAGAAGAG
AAATATATTA GCCGAATCCA GCATATTCTA GCCCCTATGA TCGGCTCCAA TAAGGTTCGG
GCCCAGGTGG TTGCCGAGGT GGATTTTACG GTCACGGAAC AAACCCAAGA ATACTATAAT
CCCGGATCGG CCGCTTTGCG CAGTGAGCAG ATGTCGGAGG AGGAGCGCAC TGGGAGCCGT
CTTCCCCAGG GAATTCCGGG AGCACTGAGC AATCAGCCGC CGGCTGATGC CCAAGCACCC
GAAACTGTTC CAGAGGCTAA CGGCGATGAA GCCCAGATAG AACCCGTCCC CACAACGCGC
AGTCAAAGGG CCACGCGGAA CTACGAACTG GACCGCACTA TCAGCCACAG CCGGTTAAGC
CCTGGATCTA TTCGGCGTCT TTCAGTGGCT GTCCTGGTGG ACGAGAAAGC GGTGACGGAT
GCTGAAGGCG CTGTCAGCAC TTTGCCTCGT TCACCCCAGG AGCTTGCCCA GGTGACCGCC
CTGGTGAAAG AAGCCGTGGG TTTTAATGCC GAGCGAGGTG ATACCATTAA TGTGATTAAT
GCCCCTTTTG TACCAGCTAA CGAGGAGGAA GCCTTCCCAG AGCTTTCCCT TTGGCAGCAG
GATTGGTTTT GGCAAGCCGT CAAACAGGGG GGAGGTATTT TAGCTATATT GCTTTTGTTG
CTGGGAGTAT TGCGCCCCGC TTTTCGCCGG CTGACCGCTT TACCTGAGCC TGTAGCTCTG
TCTGCCATCC CCAACAAGGA CGAAGAGGAA AGTGATGACG GACTACAAGA GGATCAACTA
AGCCTGAGCA GTAATAAACC AACCCTTCAG CTATCAGGAC CCCATTCGTT GGAAGCGAAC
TTGGAGATTG TTCGTGAAAT GGCCACCGGT GACTCTAGAC GTGTGGCCCA GGTTGTAAAA
AACTGGTTGG TCAGTGATGT CTGA
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| Protein sequence | MADTNTSSNP PAVTSEALPV ASTRLAALQA NIGRLSLQKQ VGLLLAIAAS VALVVGIFMW
SWAPTYQVMY GAVTGKEKGE IVAALQKANI EYRLAENTGA IMVPASKVHE VRLQLAMEGL
PRSADTGFEL LEQNPGFGAS EFLEKARYQR ALEGELARTI GALNNVRNAR VHLALPKQSV
FIRNRRAPSA SVVLDLYAGR TLDPGQVAAI THLVASSIPN LESSGVTLVD QRGNLLTRQD
RSQSLGMTEG QFEHTRRLEE KYISRIQHIL APMIGSNKVR AQVVAEVDFT VTEQTQEYYN
PGSAALRSEQ MSEEERTGSR LPQGIPGALS NQPPADAQAP ETVPEANGDE AQIEPVPTTR
SQRATRNYEL DRTISHSRLS PGSIRRLSVA VLVDEKAVTD AEGAVSTLPR SPQELAQVTA
LVKEAVGFNA ERGDTINVIN APFVPANEEE AFPELSLWQQ DWFWQAVKQG GGILAILLLL
LGVLRPAFRR LTALPEPVAL SAIPNKDEEE SDDGLQEDQL SLSSNKPTLQ LSGPHSLEAN
LEIVREMATG DSRRVAQVVK NWLVSDV
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