| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2354 |
|---|
| Symbol | |
|---|
| ID | 3704794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2698299 |
|---|
| End bp | 2699762 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637738837 |
|---|
| Product | flagellar hook-length control protein |
|---|
| Protein accession | YP_344342 |
|---|
| Protein GI | 77165817 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGC CGGATTTTTG GGTCACGCCA CTTGCTTCTT CCTCATCCGC TTCGGTGGGA
AAGCTTGGGG TGAATTCTGG AGATTCCCTT TCTGGCGAGT CAGAAGCAGC GGTGAGCGTC
AATTTTCCTG CCCAGCTTGA GGAAGTGGCT TCCGAACTTA GCTGGTTACC GGAGAAGCAG
CCATCTTCTG CGGGATTGGA GGGGAAAAAA GCAGATGCAG GAGGTGAAAT AAACCTTTCT
CAGGAATTAT TGGGCCTAGA ACAAGAAGCA GGGGAGCAGG ACTCTCCAGG GTTTGGTCTA
TCATTACTAG CATCGACGGT CTCAATGGCA GCCGGTTTTA GTCATTTTCC GCCGATGGCG
GAGGCTTTTC AAAGCAGTCC TGGAAGTGCG GATTTACCCG AAATCATAGT CTCTGGTTCT
CAATCCGCGG CACAAAGCTC ACTGTTGATT ACAAGGGATA TTGATGGAGC TCCTAGCGGT
ATTTCCCCTG ATTCAAGCAA GCCAGTAAAC TCAGCTGTTA ATCTAGTATT ATCTGGTCAG
CCGCAAAATT TGATAAATCA AAAAGCTACT AACACGCCAG AGGTACCTGC TCTAACAGGT
GCTGTTTTGG GACCAACTTT GAAAACCCCT GTGGGAGGCG CGGGGCTGCC AGTGCCTCTT
AGCCAGCTTG GTTTGGATGG CAGCAAGGAG GGGGCTTTAC CGGCGCCATT ACATGGGAAG
GAATCGGGAA CAGAAAACTC CCTCCCAATA GGGGAGGATT TCAAGCTTAG TTCTGGCTTA
GATGTATCCA CAGCGGAAAT GGATTCCCAG CTGTTTCTGG GCCATCGTGA TTCGAGTACT
AATCTTAGGG GAGGTCTGCC GGTGACAGTG GCGATGGAAG CCCCGGCTCA AGGGGATTCT
CAGGTGCTGA TGGCGCCCGC GCCATTACGG GACAGGCCGT CGTTAGCAGT ATCTCCGGCT
CCATTGAACT CCGGCTTTAC TGAGGCTGCG ATTTCCAATC TCTCTGCTAG TAGGGACAAT
CCAATGGGGC TGACCCTGGA ATCCGCGATC CAGGAGTCAG GATGGGGAGA AGAACTTGGC
GAGCGGATGA CTTGGCTGGT CAAAGATAAG CTGCAATTTG CGGAACTGCG GCTCACCCCC
TCCCACCTTG GTCCCCTGGA GGCACGTATT AATATGCACC ATGATGAAGC AAGTATCACT
TTCCATGCGC CCCAAGCGGC AGTTCGTGAA GCCTTGGAAG CAGCCCTTCC CCGCTTACGG
GAATCCTTTG CGGAGCAAGG GCTGAATTTA GTCAATGTGG ACGTCTCTCA GCAAGGATTT
TCTGGACAGC AGAGGCAAGC GGCTCAGTCT AAAAACTTGC AGGCGACTTT AACTGAAGAA
TCCCCCGAAA CCGCTGCTTC GGAGGATTCA GCAGGAGGTA TGCGCCTTTT TGCCCAGCAA
GGTGGCGTGG ATTACTATGC GTGA
|
|---|
| Protein sequence | MTTPDFWVTP LASSSSASVG KLGVNSGDSL SGESEAAVSV NFPAQLEEVA SELSWLPEKQ
PSSAGLEGKK ADAGGEINLS QELLGLEQEA GEQDSPGFGL SLLASTVSMA AGFSHFPPMA
EAFQSSPGSA DLPEIIVSGS QSAAQSSLLI TRDIDGAPSG ISPDSSKPVN SAVNLVLSGQ
PQNLINQKAT NTPEVPALTG AVLGPTLKTP VGGAGLPVPL SQLGLDGSKE GALPAPLHGK
ESGTENSLPI GEDFKLSSGL DVSTAEMDSQ LFLGHRDSST NLRGGLPVTV AMEAPAQGDS
QVLMAPAPLR DRPSLAVSPA PLNSGFTEAA ISNLSASRDN PMGLTLESAI QESGWGEELG
ERMTWLVKDK LQFAELRLTP SHLGPLEARI NMHHDEASIT FHAPQAAVRE ALEAALPRLR
ESFAEQGLNL VNVDVSQQGF SGQQRQAAQS KNLQATLTEE SPETAASEDS AGGMRLFAQQ
GGVDYYA
|
|---|
| |