Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2305 |
Symbol | secY |
ID | 3704531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2654620 |
End bp | 2655981 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637738784 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_344293 |
Protein GI | 77165768 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0325321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGAAAC GCGCCTCCAA AAAGTCATTT GATCGAAGTT CTTCCGGCAA ATTAGTTGAG TTGCGCCAAA GACTACTATT TGTTATAGGT GCTCTGCTAG TTTACCGGGT TGGCACATTT ATTCCTGTGC CGGGGATTGA TCCGGTAACG CTGGCTACGC TGTTTGAGCA ACAGCGCGGC ACTATACTAG ACATGTTTAA CATGTTTTCT GGAGGAGCGT TAGAGCGCTT ATCGGTCTTT GCATTAGGGA TTATGCCGTA TATTTCGGCT TCCATCATTA TGCAGCTGCT AACGGCGGTT CATCCAAAAT TAGAGCAGCT TCGAAAAGAG GGTGCCTCGG GGCGGCGAAA AATTACCCAG TATACACGCT ATGGCACGTT GGTATTGTCT GCTATACAAG CGGTAGGGGT AACTATTGCG TTGGAGTCCC AACAAGTTGG AGGCGCTTCT GTCGTTATCG AGCCGGGCCT GATTTTCAGA GTAACAGCGG TAATAACGTT GGTTACTGGA GCTTTATTTT TAATGTGGCT AGGCGAGCAA ATTACAGAAC GGGGTATAGG AAATGGAATT TCGCTAATTA TCTTTGCAGC AATTGTTGCT GGGTTGCCTT CGGCGCTTGG TGGAACGTTA GAGTTAGCAC GAACTGGTGA ATTACATACT TTCACAGTAT TGGTGCTTTT GACATTAGCT CTATTAGTTA CGGCTTTTGT GGTTTTTATG GAACGGGCCC AACGACGCAT CTTGGTGCAT TATGCTAAAC AGCAGCATGG AAGAAAAGTT TTCGGGGGGC AGGTGAGTCA TTTGCCGTTA AAAATTAATA TGTCAGGCGT TATTCCCCCT ATTTTCGCAT CAAGCATTAT TTTATTTCCG GCAACGGTAT CGAGTTGGTT TGGTGCTAGT GAAGGGATGG GCTGGCTCAG GGATTTGTCT GCTACTCTTT CTCCAGGACA ACCTATTTAT GTTCTCCTGT ATGCTATAGC TATCATCTTC TTTTGTTTCT TTTATACAGC GTTGGTATTC AACCCAAAAG AGACAGCGGA TAATTTAAAG AAATCGGGGG CATTTATCCC CGGAATACGG CCGGGAGTGC AGACTACTCG GTATATCGAT ACCGTTATGG GTCGGCTTAC CTTGGGTGGC GCAATCTATG TTACTGCGGT ATGCCTTTTA CCCGAGTTCT TGATTTTGTA TTGGAATGTT CCGTTTTATT TTGGGGGTAC CTCCTTACTG ATTATTGTGG TTGTTGTTAT GGATTTTGTC GCTCAGGTGC AGGCGCATTT GATGTCTCAT CAATATGAGA GCTTACTTAA AAAATCGCAA TTAAAGGGAA GTGGAGCAAC TACTGGGAGC CTATTACATT GA
|
Protein sequence | MAKRASKKSF DRSSSGKLVE LRQRLLFVIG ALLVYRVGTF IPVPGIDPVT LATLFEQQRG TILDMFNMFS GGALERLSVF ALGIMPYISA SIIMQLLTAV HPKLEQLRKE GASGRRKITQ YTRYGTLVLS AIQAVGVTIA LESQQVGGAS VVIEPGLIFR VTAVITLVTG ALFLMWLGEQ ITERGIGNGI SLIIFAAIVA GLPSALGGTL ELARTGELHT FTVLVLLTLA LLVTAFVVFM ERAQRRILVH YAKQQHGRKV FGGQVSHLPL KINMSGVIPP IFASSIILFP ATVSSWFGAS EGMGWLRDLS ATLSPGQPIY VLLYAIAIIF FCFFYTALVF NPKETADNLK KSGAFIPGIR PGVQTTRYID TVMGRLTLGG AIYVTAVCLL PEFLILYWNV PFYFGGTSLL IIVVVVMDFV AQVQAHLMSH QYESLLKKSQ LKGSGATTGS LLH
|
| |