| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2300 |
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| Symbol | |
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| ID | 3704506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2651873 |
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| End bp | 2652871 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637738779 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_344288 |
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| Protein GI | 77165763 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.626083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGTAT CTAATTTTCT TAAGCCCAGG ATAGTGGATG TCCAGCGTAT AAATGATTAC
GCAACTAAGG TTACTTTAGA ACCGCTAGAA CGCGGATTCG GGCATACCTT GGGCAATGCT
CTGCGCCGAA TCTTACTATC TTCAATGCCA GGCTGTGCCA TTATCGAAGC GCAAATTGAT
GGTGTGTTAC ATGAATATAC CACCAAGGAA GGGGTGCAGG AGGATATGAC GGAAATCCTG
CTTAATCTTA AAGGAGTTGC AGTCAAGTTG CATGGCCGTG ATGAAGTCAC CTTGAATTTG
AGCAGTAAAG GGCCGGTAAC GGTGACTGCG GGAGATATTC AACTGGAGCA TGATGTAGAG
GTTATTAATC CTGAGCACGT TATTGCTCAT CTCACTAAAT CTGGTGAACT TAACCTTACT
ATGAAGGTTG TCCGTGGCCG AGGTTATCAG TCAGCTTCCA TGCGAATTCC TAAGGAAGAG
GATGAACGCT CTATCGGGCA CCTAATTCTT GATGCTTCGT TTAGCCCTAT CCGAAGAGTG
ACTTATGAAG TAGATAGTGC CCGCGTTGAG CAGCGAACCG ATTTAGATAA GCTGATTATA
GAGATCGAAA CGAATGGTAC TATCGCCCCG GATGAAGCAG TACGAAAGGC TGCAACCATT
CTGCAAGATC AGCTAACGGC TTTTGTTGAG TTGGAAGGTA AAATTGAAAC GGCTAAAGAG
AAAAAGGCGG CCGAGATTGA TCCTGTGCTA TTACAGCCGA TAGACGATCT GGAATTGACG
GTACGTTCAG CAAATTGTCT TAAAGCAGAA AATATTTACT ATATTGGCGA TCTTATTCAG
AAAACGGAGG TTGAGTTATT AAAAACTCCT AATTTGGGTA AGAAATCGCT AACGGAAATT
AAAGATGTAT TGACATTGCG GGGGCTATCT TTAGGTATGC GCTTAGAAAA TTGGCCGCCG
GCGGGGCTAC GTGAAGAAGA AACTAAAGTT ACTGCTTGA
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| Protein sequence | MQVSNFLKPR IVDVQRINDY ATKVTLEPLE RGFGHTLGNA LRRILLSSMP GCAIIEAQID
GVLHEYTTKE GVQEDMTEIL LNLKGVAVKL HGRDEVTLNL SSKGPVTVTA GDIQLEHDVE
VINPEHVIAH LTKSGELNLT MKVVRGRGYQ SASMRIPKEE DERSIGHLIL DASFSPIRRV
TYEVDSARVE QRTDLDKLII EIETNGTIAP DEAVRKAATI LQDQLTAFVE LEGKIETAKE
KKAAEIDPVL LQPIDDLELT VRSANCLKAE NIYYIGDLIQ KTEVELLKTP NLGKKSLTEI
KDVLTLRGLS LGMRLENWPP AGLREEETKV TA
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