| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2262 |
|---|
| Symbol | |
|---|
| ID | 3705054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2608588 |
|---|
| End bp | 2609436 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637738741 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_344250 |
|---|
| Protein GI | 77165725 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.262308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAATA TATCGATTAT GCCTCTAGAG AGTCTGCTTG GCATTGTTTG TTATTGTGCT
GCCGGCATCG CTCTAGGCTG GTGCTTATTA AATGCCAATG CCAAAAAAGG CAAGCGGAGC
GCCAGCAAAC AACTCGCAGG CCTATTGGGG CTAGCGGGGG TAGTTTTTCA TAGCTTCGTG
CTAGCTAACC ATCTTTTTAC AACCTCTGGA ATCAGCCTTA GCTTTACCGA CGCGCTGTCC
GCCGCGGCCT GGCTAATGGC CCTGCTCTTA CTAGCCGCCA GCCTCAAAAA ACCCATAGAA
AATATGGGAA TTGCCGTCTA TCCCTTTGCG GCCATTGCGC TCGGGACGCA AGATTTATTT
CCATCCCAGC ATATCGTCGT TAAATTCAGC GCCGAATCCG GCGTGATGAA GCCTTTGGAA
ATTCACATTC TAATCTCTCT GGTAGCCTAC AGCCTGCTCG CTTTGGCAGC CATGCATGCC
CTCCTGCTGG CGGTCCAAAA TCACCAGATC CGGAATAAGC ATCCAGGCGG CTTTATCCGC
GCCCTACCGC CCTTGCAGAC CATGGAAACC CTTCTATTCC AGATTCTCAC GGTGGGGTTT
GTGCTGCTTT CACTGAGTTT ATTCAGCGGC ATTCTCTTTC TAGAAGATAT ATTTGCCCAA
CACCTTGCCC ATAAAACCGT ATTCTCGATC GTTGCTTGGC TGGTGTTTGG GATCTTGTTA
TGGGGGCGTT GGCGCTCCGG CTGGCGGGGG CGCACGGCAA TCCACTGGAC TCTATGCGGT
TTTTTCTTCC TGATGTTAGC CTACTTCGGC ACTAAATTGG TACTAGAAAT TGTATTACAA
CGCACTTAG
|
|---|
| Protein sequence | MLNISIMPLE SLLGIVCYCA AGIALGWCLL NANAKKGKRS ASKQLAGLLG LAGVVFHSFV
LANHLFTTSG ISLSFTDALS AAAWLMALLL LAASLKKPIE NMGIAVYPFA AIALGTQDLF
PSQHIVVKFS AESGVMKPLE IHILISLVAY SLLALAAMHA LLLAVQNHQI RNKHPGGFIR
ALPPLQTMET LLFQILTVGF VLLSLSLFSG ILFLEDIFAQ HLAHKTVFSI VAWLVFGILL
WGRWRSGWRG RTAIHWTLCG FFFLMLAYFG TKLVLEIVLQ RT
|
|---|
| |