| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2257 |
|---|
| Symbol | rplS |
|---|
| ID | 3705419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2605058 |
|---|
| End bp | 2605405 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637738736 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_344245 |
|---|
| Protein GI | 77165720 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00054587 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA ATATTATTAA GGCAATTGAA TCAGAGCAGC TAAAGCAAGA TTTACCAGAA
TTTTGTCCAG GAGACACGGT TCAGGTGCAG GTTCGGGTGA AAGAGGGCAC GCGTGAACGT
TTACAGGCCT TTGAAGGGGT TGTGATTGCG AAGCGTAACC GTGGTCTCAA CTCTTCATTT
ACCGTGCGCA AAATTTCTCA TGGGGAAGGG GTTGAGCGGG TTTTTCAGAC CCATAGTCCT
ACCTTAGAAA GTATTCTGGT TAAACGCCGG GGTGATGTGC GCCGTGCTAA ACTCTATTAT
CTGCGGGAGC GGAGAGGCAA GGCGGCCCGT ATTAAAGAAA AGATTTAA
|
|---|
| Protein sequence | MSNNIIKAIE SEQLKQDLPE FCPGDTVQVQ VRVKEGTRER LQAFEGVVIA KRNRGLNSSF
TVRKISHGEG VERVFQTHSP TLESILVKRR GDVRRAKLYY LRERRGKAAR IKEKI
|
|---|
| |