| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2255 |
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| Symbol | |
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| ID | 3705417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2603288 |
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| End bp | 2604205 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738734 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_344243 |
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| Protein GI | 77165718 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000204462 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAGCT CTGAACAGGC TCGCTTCTCA GCCGATCAGG GGCACCTGGA GCGCTTTCTG
AATGCCTTAT GGTTAGAAGA AGGGCTGGCG GAGAATACTC TAGCGGCTTA TCGCCGTGAT
TTAGAGAGAT TTTCCCGCTG GCTGCACTCC CAGGGACGAA CCCTCATTGG GGCGCAACGG
GAAGATTTGC TGGCCTATCT AGCGCACCGC TTGGAAGGGG GCGACAAATC TAGAAGCGTT
GCCCGTTCGG TTTCTAGCCT ACGCCGTTTT TACCGTTATC TCATGGGGGA GAAAATCCGC
GACAACGACC CCAGTGATCG TGTGGAGTCC CCTCGGCTTG GGAGGCTCTT GCCCGAGTCA
TTGAGTGAAG AGGAAGTGGA AGCCTTATTA GCCGCCCCTA AGACTGAGGA TAGCCTGGGA
CTACGGGATC GAACGATGTT GGAAACTTTA TATGCTACCG GACTGCGGGT TTCTGAATTA
GTTAATTTAA CTCTTCCTCA ATTGAATCCT CGGCAGGGAG TAGTCTATTT AAGTGGTAAA
GGCAATAAAG AACGTTTGGT GCCTTTAGGA GAAGTTGCGC TGAGCTGGCT TGACCGTTAT
TGCCGTGAAG CCCGTCTAGG ATTAGTTAGG AGTCAGGTTA ATGAAATATT ATTCCTGACC
CGGCGCGGCG GCGCCATGAG TCGGCAAGCT TTCTGGTATC TGATTAAGCG TTATGCCCGC
CAGTCTGGTA TCCAAAAGGC CCTTTCACCT CATACTTTGC GCCACGCTTT TGCCACCCAT
CTTTTGAATC ATGGGGCGGA TCTGCGGGTA GTGCAAATTT TGCTTGGGCA TGCAGACCTT
TCGACTACGC AAATTTACAC GCACGTGGCT AGAGCTCGTT TGCAACAGCT TCACCAGCAG
CATCATCCTC GCGGCTAA
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| Protein sequence | MISSEQARFS ADQGHLERFL NALWLEEGLA ENTLAAYRRD LERFSRWLHS QGRTLIGAQR
EDLLAYLAHR LEGGDKSRSV ARSVSSLRRF YRYLMGEKIR DNDPSDRVES PRLGRLLPES
LSEEEVEALL AAPKTEDSLG LRDRTMLETL YATGLRVSEL VNLTLPQLNP RQGVVYLSGK
GNKERLVPLG EVALSWLDRY CREARLGLVR SQVNEILFLT RRGGAMSRQA FWYLIKRYAR
QSGIQKALSP HTLRHAFATH LLNHGADLRV VQILLGHADL STTQIYTHVA RARLQQLHQQ
HHPRG
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