| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2229 |
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| Symbol | |
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| ID | 3705109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2574115 |
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| End bp | 2577720 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738705 |
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| Product | hypothetical protein |
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| Protein accession | YP_344219 |
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| Protein GI | 77165694 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.186545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACAC CGCAGGAGCG TAAGCTAGAT CGCCGCGCCT TTCCGCGCCA ACCCGTACAG
ATGGATGCTT ATATCAATAG CGCACGATTA GGGCGGCGCG AGGTGGAAAT TCGAGATTTT
TGCCTGGGCG GATTATTTTT GGTCCCTAGG GATTCCCAGG CGGCTTATAT TCAGTTTCGA
GGGCATACGG GCGAGACGAT CACCGTCCAT CTCTCTTGTC CAACACCTGC CGGTCATAAG
GATTTTTCGC TTAATGTCCG TATGGCGCGA GTGTCTGAAG GAGGAATAGG CGTAGCATTT
TCCAAGCCTG GGCCCGAGGT ATTGCAAGTT CTCCACTATC TTACCGCCCA GTCACGGCGA
GTTCCTCCCA AGCCGACACC GGCGCTGAAA CGAACTGTGC ACCCCGATGA GCGAAAAGGT
AAGCAAGGAG ACAATGCGCT CATAAAAGCT TGCCAGCAGC AAATAATTGA TTTTTCTCCT
ATAATTTTAA GGGATTTTTT TGAGCGGCTG GATGAAGCCT TATTTCTCTG TGCCAGGGAT
GCGGAAAATA ATCTGGAGCA AACCTTCTAT CTTGATGCCA TTGAAGAAAT AAAAGGTCAT
CGCCCGCAGG TTGAGGAACA CTGGCAAAAA AAGATTCTGG CGCGACTAAG CGCCTTGGGC
ACCACAGGTA ATGCTCCTCT TCCTCCGCGA GAGGATAAGA CGGAGTCTTC GAAGCTTTCC
ATGGTAGACA AGGACGAATT TGAAGATTGG TTAGCGATTG CCGAAGCCGT ATCGAAAATG
GAGGCCCGCT ATGCAGATCC ATTATTTGAG CTTGAGAAGC GCTTTAGCCG CCTGGCGGGG
GAGAGCCTTG ATAAGGAAAA TAACCCTGTG GGGCCAAGGG CTATTTGCCG GGCGCTGCAA
GAAGCAATAC GGGATCTAGA GATAAGCCAT TATATCAAGC AACGTATCTA CAAGGTATTC
AAGGAGACGG CTGAAGACAA ATTAAGTTTA TTGTACAATA ACTTAAATGA ACTACTAAGA
GGGGAAGGCA TTTTGCCATC CCTAGAACGG AAATTCGCCG CCCCCCAGAG GCAAAGTACT
CTAAAGAAAG CTCTACCGTT TAGCGAGGAG TCGTCAGTTC AAGCCAATGG AGCCGCTTCT
TCTTCAATGC CCGATAAACA AGAGGAAGCC CCGTTAAGCA ATCCCGTCTC CCCTGCCTCC
ATATCCCCTT CTTCTGTCCT GAAACCGGAG ACCCATGCTT TTGATCGCCC GCAACAAGCT
GATTCTACTA TAGCTACGGC TGAAGCTTAC CGGGTGACTC GTGAATTACT GGGTTTATAT
AAACTAGGTG GACGGCGCCC AAGAGGAGGA GAAGAACCCT CGGGAAAGGC TGCGGCTAGC
TCATTAAAGG CGAATAAGGC ATTCGCGAAT TCCAGCATGA CCAGTGTTAG CGAGGATAGA
ATTGCTAAGC GGATGGCCCA TCTTCTACCA GAGATCATGG AGCAGGAAGG CACTGTTCAC
AACGATCGCA GCAGTGCCGA AGCCTGCGAG CTTATGGAGA TTACGGGTAA CCTGCTGGTA
TCTATCTTAG AAGATAGTGT TCTGTCGGAG AATACGAAAA GCTGGATCGA GCAGTTGGAA
GCCCCCTTAC TGCGGCTCGC GGTCCTGGAT AAAGCTTTTC TGCATTTGGA AGATCATCCC
GCACGACAGC TTCTTAATCT ATTGGCGCAG CTTGAAATTC CTCCAAGCGA GGAGCGCGAT
GACATCGATG CGCAACTTGA GGACAACATT GATTATTTGG TGGAATATAT TGCTCGCGAT
TTTGATCAGG ATGTTGCTAT CTTTAACCGG GTTCTAGATG AGCTTAAGCA TCTGCTTGAA
CAGCGGACTC AGTCTATTTC TAGCAATATT GCTCAGGTAG TTGAGAGCTA TAAAGCACAA
CAAGAATTAA AAAAAAAGAG GCGGAGGATC GCCGAGAAGC AGCTAGAAGC AGGGCTGGGT
GGTGCCGGCG ATAGTCGTTG GGGCGATCCA ATGCCGAGCG TTAAAAATAG AGAGGAGGAT
CCGGAAGAGT GGGTAAATCG AGCTAAACAG CTACCTCTCC ATTGCTGGGT ACAATTTGCT
GATGGGCAAA ATCACCTGCG GCGTTTGCAG CTGGTGTGGG TTGCCGAAGA TTGTACTACC
TTTGTCTTTG TGGACTCTAA AGGTAGAAAA GCCGCCACTT TGAGTCTTAA TGAAGTTGCA
ATGCAGCTCC GCCGGGGAAC AGCCACGGTG CTAGAAGATG CGAATGTCCC TCTTTTGGAT
CGGGCGCAAT ACGCGGTTCT GCAAAAATTC CACAGCCATA TTGCTTATGA GGCGACCCAC
GATCCCCTGA CCGGATTGGT TAACCGCAAG GAATTCGAAC AGCAGGCAAA CCGGGCTCTA
GCCAAGGCAG ATCATGAAGC TCAATCCTAT GTCTTGCTCT ACTTGGATCT AGATCAGTTC
AAAATTATCA ACAGCACTTG TGGTTATGAG GCGGGAGATG CGCTATTAAA AGAAATTGCC
AGCTTGCTAA CGGAATTCTT GCCTGATGGA GGAATTTTGG CCCGTTTAGG GGATAATCAA
TTTGGAGTAT TGCTAAATCA ATGTTCCCAT GATGAGGGCT GTGAGATTGC GGAGCAGCAA
CGAATTGCCA TTGATAATCA TAGGCTAGTT TGGAATAACA AGCGTTTATC TGTGGGTGCC
AGTATTGGCT TGGTTTCCGT ATCCGAGCAA AAATGCGACG CAGCTGTATT GTTGCAACGA
GCAGAGGCAG CCTGCATGGA AGCAAAGGAG GCGGGAAGAA ACCGCATTCA AGCTTGCGAG
TTTGATGATG AGGAGTTTAG GCGCCGGCAT GGCATGATAG AGTGGGTTGC GAGAATCGAT
GAAGTATTGG AAGATGGTCG GTTGCAGCTA TGGTGTCAGC GAATTACCCC CATTGCGGAT
CATTTAGAAA TGGAACCCCA TTATGAGATC TTGCTACGTC TCCGGGACCA GGATGGGCGG
TGGATCGCCG CTGGGGAGTT TATTCAGACG GCGGAGTTCT ATCATCGGAT GGCGGCTATC
GATCAATGGG TGATTCAATC TGCTTTTCGG TGGATGGCTG ATCATAAGGA GAGGCTAGAG
CAGCTTGGAG GGATAGCGAT CAACCTTTCA GGGCAATCCT TGAATGATAG GCGGCTAGTG
ACATTTATAA AACGTGAATT TGCCAGAACC GGGGTGCCTC CCCAGCGAGT TTGCTTTGAA
ATTACGGAAA CCGCTGGCGT TGCTAATCTC TCCCATTCCG CCCAGTTGAT TGAGGCAGTG
AAGGATTTAG GCTGTCATTT TTCATTAGAT GATTTTGGCA GTGGCTTGTC CTCCTATTCA
TATCTAAAAA ACCTGCCGGT AGATTATCTT AAGATTGATG GAGCATTTGT GAAAGACATT
GCTACCAGTC CCAGCGACTA TGCAGTGGTC AAATCTATTA ATGAAATCGG CCATTTTATG
GGCAAGAAAG TGATTGCTGA ATTTGTAGAA AGCAAGGCTA TTTTGGCGAA ACTTCAAGAA
ATTGGCGTTG ATTTCGCGCA AGGATATGGT ATAGAGCCAC CCCAAATCTT GAGCGCAATA
GAATAA
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| Protein sequence | MYTPQERKLD RRAFPRQPVQ MDAYINSARL GRREVEIRDF CLGGLFLVPR DSQAAYIQFR
GHTGETITVH LSCPTPAGHK DFSLNVRMAR VSEGGIGVAF SKPGPEVLQV LHYLTAQSRR
VPPKPTPALK RTVHPDERKG KQGDNALIKA CQQQIIDFSP IILRDFFERL DEALFLCARD
AENNLEQTFY LDAIEEIKGH RPQVEEHWQK KILARLSALG TTGNAPLPPR EDKTESSKLS
MVDKDEFEDW LAIAEAVSKM EARYADPLFE LEKRFSRLAG ESLDKENNPV GPRAICRALQ
EAIRDLEISH YIKQRIYKVF KETAEDKLSL LYNNLNELLR GEGILPSLER KFAAPQRQST
LKKALPFSEE SSVQANGAAS SSMPDKQEEA PLSNPVSPAS ISPSSVLKPE THAFDRPQQA
DSTIATAEAY RVTRELLGLY KLGGRRPRGG EEPSGKAAAS SLKANKAFAN SSMTSVSEDR
IAKRMAHLLP EIMEQEGTVH NDRSSAEACE LMEITGNLLV SILEDSVLSE NTKSWIEQLE
APLLRLAVLD KAFLHLEDHP ARQLLNLLAQ LEIPPSEERD DIDAQLEDNI DYLVEYIARD
FDQDVAIFNR VLDELKHLLE QRTQSISSNI AQVVESYKAQ QELKKKRRRI AEKQLEAGLG
GAGDSRWGDP MPSVKNREED PEEWVNRAKQ LPLHCWVQFA DGQNHLRRLQ LVWVAEDCTT
FVFVDSKGRK AATLSLNEVA MQLRRGTATV LEDANVPLLD RAQYAVLQKF HSHIAYEATH
DPLTGLVNRK EFEQQANRAL AKADHEAQSY VLLYLDLDQF KIINSTCGYE AGDALLKEIA
SLLTEFLPDG GILARLGDNQ FGVLLNQCSH DEGCEIAEQQ RIAIDNHRLV WNNKRLSVGA
SIGLVSVSEQ KCDAAVLLQR AEAACMEAKE AGRNRIQACE FDDEEFRRRH GMIEWVARID
EVLEDGRLQL WCQRITPIAD HLEMEPHYEI LLRLRDQDGR WIAAGEFIQT AEFYHRMAAI
DQWVIQSAFR WMADHKERLE QLGGIAINLS GQSLNDRRLV TFIKREFART GVPPQRVCFE
ITETAGVANL SHSAQLIEAV KDLGCHFSLD DFGSGLSSYS YLKNLPVDYL KIDGAFVKDI
ATSPSDYAVV KSINEIGHFM GKKVIAEFVE SKAILAKLQE IGVDFAQGYG IEPPQILSAI
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