Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2214 |
Symbol | |
ID | 3705094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2557583 |
End bp | 2558275 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637738690 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_344204 |
Protein GI | 77165679 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAACA TGGTCGAAAT CCGCCATCTC AGCAAATCGT ACTGGCGGGG CAACCAGAGA GTTCCCGTCC TTGAGAATAT CAACCTAACG ATTGGGGAAG GAGAATTTAT TGCCCTTATG GGGCCGTCCG GCTCGGGGAA AAGCACTCTG CTGAATTTAG TGGCGGGTAT CGACACACCT GACGGAGGTA GCCTGATAGT CAATGGTATT GACATCACGA CCCTATCCGA GGGGGCACTT GCCCAATGGC GGGCCGAGCA TGTGGGTTTT ATTTTTCAAT TCTATAACTT GATGCCCGTC CTTACTGCCT TTGAAAATGT AGAACTGCCG CTGCTATTAA CCGCTTTATC CCGCAAAGAG CGGCGGGAGC ACGTGGAACT GGTGCTCGCT ATCGTGGGCC TTCGTGATCG GATGGATCAT TACCCCTCCC AACTCTCCGG TGGACAACAG CAACGGGTCG CCATCGCCCG GGCGGTGGTT ACCGACCCCA CCCTTATCGT CGCCGACGAG CCCACAGGCG ATCTGGACCG GGAATCGGCC CGGGAGATTT TAAATCTCCT ACAACAACTC AACCGGGAGC TTCATAAAAC CGTGATTATG GTCACCCACG ATGAATTAGC CGCTAAGCGG GCCCATGTCA TCCGGCATCT GGACAAAGGG GTGCTGGACG ATCACAACCT TTCTCCCTCT TAG
|
Protein sequence | MDNMVEIRHL SKSYWRGNQR VPVLENINLT IGEGEFIALM GPSGSGKSTL LNLVAGIDTP DGGSLIVNGI DITTLSEGAL AQWRAEHVGF IFQFYNLMPV LTAFENVELP LLLTALSRKE RREHVELVLA IVGLRDRMDH YPSQLSGGQQ QRVAIARAVV TDPTLIVADE PTGDLDRESA REILNLLQQL NRELHKTVIM VTHDELAAKR AHVIRHLDKG VLDDHNLSPS
|
| |