Gene Noc_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2214 
Symbol 
ID3705094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2557583 
End bp2558275 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content54% 
IMG OID637738690 
ProductABC transporter, ATPase subunit 
Protein accessionYP_344204 
Protein GI77165679 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACA TGGTCGAAAT CCGCCATCTC AGCAAATCGT ACTGGCGGGG CAACCAGAGA 
GTTCCCGTCC TTGAGAATAT CAACCTAACG ATTGGGGAAG GAGAATTTAT TGCCCTTATG
GGGCCGTCCG GCTCGGGGAA AAGCACTCTG CTGAATTTAG TGGCGGGTAT CGACACACCT
GACGGAGGTA GCCTGATAGT CAATGGTATT GACATCACGA CCCTATCCGA GGGGGCACTT
GCCCAATGGC GGGCCGAGCA TGTGGGTTTT ATTTTTCAAT TCTATAACTT GATGCCCGTC
CTTACTGCCT TTGAAAATGT AGAACTGCCG CTGCTATTAA CCGCTTTATC CCGCAAAGAG
CGGCGGGAGC ACGTGGAACT GGTGCTCGCT ATCGTGGGCC TTCGTGATCG GATGGATCAT
TACCCCTCCC AACTCTCCGG TGGACAACAG CAACGGGTCG CCATCGCCCG GGCGGTGGTT
ACCGACCCCA CCCTTATCGT CGCCGACGAG CCCACAGGCG ATCTGGACCG GGAATCGGCC
CGGGAGATTT TAAATCTCCT ACAACAACTC AACCGGGAGC TTCATAAAAC CGTGATTATG
GTCACCCACG ATGAATTAGC CGCTAAGCGG GCCCATGTCA TCCGGCATCT GGACAAAGGG
GTGCTGGACG ATCACAACCT TTCTCCCTCT TAG
 
Protein sequence
MDNMVEIRHL SKSYWRGNQR VPVLENINLT IGEGEFIALM GPSGSGKSTL LNLVAGIDTP 
DGGSLIVNGI DITTLSEGAL AQWRAEHVGF IFQFYNLMPV LTAFENVELP LLLTALSRKE
RREHVELVLA IVGLRDRMDH YPSQLSGGQQ QRVAIARAVV TDPTLIVADE PTGDLDRESA
REILNLLQQL NRELHKTVIM VTHDELAAKR AHVIRHLDKG VLDDHNLSPS