Gene Noc_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2168 
Symbol 
ID3704842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2501472 
End bp2502554 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID637738644 
Productglycosyl transferase family protein 
Protein accessionYP_344158 
Protein GI77165633 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA TAAATGGAGA GCGTAGGAAC AAGGTCAAGG GAGCGGAGCG CCATCCACTT 
GTTTCCGTCG TTATAGTCAA TTTCAATGGC GGTTGGCTGC TAACCGAAGC GGTGCGTTCT
GTGTTGGAGG CGGATATCTC ATTAGAGATA ATCGTTGTGG ATAATGGTTC CCGCGATAGC
AGTTTGACGT GCTTGCGGAG CATCGTGGAT GGGGATTCAC GAGTGCGGAT GATTGAAAAT
AACCGCAACC TAGGATTTGC TCGGGCAAAT AATATTGCGC TCAGGCAGGT GTTGGGAGAG
TATGTTCTGT TGCTAAATCC CGACTGTGTT ATCCGTCCAA ATACGCTCCC AAGTATGCTT
GAGGCCATGG TTAGGGAGCC GGAGGCAGGA ATGGCGGGTT GCCTGCTTCG TAACCCGGAC
GGAACCGAAC AAGCCGGCTG CCGCCGTAGT GTGCCTACAC CGTGGCGGAC CTTTGTCCGG
GTGCTCCATT TGAATAAGCT ATTTCCCTAT CACCCTAGAT TTCAGGGGTT TGTCCTTAGC
CGTCAGGTTT TGCCTAGAGA GTCCTTCTCT CTCGAAGCTA TCTCTGGCGC TTTTATGCTC
GTTCGACGGG AGGGACTCAA ACATGTCGGT TTGCTGGATG AAAATTATTT TCTCCATTGC
GAGGATTTGG ACTGGTGCAT GCGATTTCGG CAGGCAGGTT GGAAAATTTT ATTCGTCCCG
AGCGTAGAGG TGGTCCACTA TAAGGGGACT TGCAGTAAGG ATTGGCCTAT CCGCGTGCTT
TGGTACAAGC ATAAGGGCAT GGTGTATTTT TATCGGAAAT TCTTTCGCCA CCAATATCCC
CTATCGCTTA TGGGGTTAGT AACCGGTGCC GTGTGGGGGC GTTTTTGCGT GTTGGCTGGG
CTGACCTTAC TACGGCGGCT TGTCGCTGAA GGCAGAGCTA AAGCCGGATT TAGAATGAGG
AATACTTTTT ACTTGGCTGG GAGTTCCCCG AAAGTGGCGA GCACTTCGGC TACGGCCTAT
CGGGCTAAGC CGGAAAGCAC CAGCGTTTCA GGGGGAGTAG CAAAACGTGC CCATAGCCGC
TAA
 
Protein sequence
MKSINGERRN KVKGAERHPL VSVVIVNFNG GWLLTEAVRS VLEADISLEI IVVDNGSRDS 
SLTCLRSIVD GDSRVRMIEN NRNLGFARAN NIALRQVLGE YVLLLNPDCV IRPNTLPSML
EAMVREPEAG MAGCLLRNPD GTEQAGCRRS VPTPWRTFVR VLHLNKLFPY HPRFQGFVLS
RQVLPRESFS LEAISGAFML VRREGLKHVG LLDENYFLHC EDLDWCMRFR QAGWKILFVP
SVEVVHYKGT CSKDWPIRVL WYKHKGMVYF YRKFFRHQYP LSLMGLVTGA VWGRFCVLAG
LTLLRRLVAE GRAKAGFRMR NTFYLAGSSP KVASTSATAY RAKPESTSVS GGVAKRAHSR