Gene Noc_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2165 
Symbol 
ID3704839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2498598 
End bp2499608 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content48% 
IMG OID637738641 
Productflagellar motor switch protein FliM 
Protein accessionYP_344155 
Protein GI77165630 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTA CTGATATTCT TTCCCAAGAT GAGGTAGATG CCTTGCTTTC CGGTATTGCC 
GGTAGTAGGA GTGAAGCCGA CCCACGGGTT CTGGGAGATG AAAAGACGAT TCGCCCTTAC
GATTTTAGCA GTGAAGACCG CATTGCTAGG GCTTATGTTC CCCTGCTAGA GATGATTAAC
GAGCGTTTTG CGCGCCAATT TCGCCTCAGC TTATTTAACC TGTTACGGCG GGCGACCGAG
GTTACGGTTG GAGGAGTGCA GGTGCTCAAG TTTTCTGAGT ATCTGCATAC TCTCTTTATG
CCTACTAGCT TAAATCTAGT GCAGATAGAT CCTCTCCGGG GGACGGGATT GTTCGTGTTT
GATCCTAAGT TGGTATTTAT GCTGGTAGAG CAGTATTTCG GCGGCTCCGG GCAATTTTAT
AATCGCCTTG AAAACCGGGA ATTTACGCCT ACTGAGGTGC ATATTATCCA ATTGGTTTTA
GAAAGAACAT TTGCTGATCT AAAGCAGGCT TGGGAGCCGG TGTTGGCAGT CAATTTTGAG
TATTTGCAGA CGGAGCTTAA TCCCCGGCTT GCCACCATTG CTAGCTCCAG TGAGATGGTG
GTGGTTTCCA CCTTTCATGT GGAGTTTGAG GGAGGGGGGG GAGAATTTCA CATTGCTTTG
CCCTATACCC TGCTAGAGCC TGTGCGTGAA TTGCTAGCTA CTGGAAAAAA AGATGATTTC
GCTCAGGCAG ATGGTGGCTG GAATCAGGCT TTGCGGAAAA ATGTTTCGGA TGCTGAAGTG
GAATTGTCTT GTACCTTAAC GGAAATTCAG CTTTCCTTAG GGGAGATATT AGCGCTCAAG
TCAGGAGATA TTTTACCCAT TGAACTGCCG TCCACCGTCA CCGCCCTTGC TGATGGTATT
CCCGTATTCC GGGTCCGTTA TGGGATTCAC CATGGTAGCC GTGCTCTAAA AGTAGTAGAG
CGCCTACTTT CCCCCGAGTC GTTTACCGAA AAGTCATCCG CTGAATTATA G
 
Protein sequence
MAATDILSQD EVDALLSGIA GSRSEADPRV LGDEKTIRPY DFSSEDRIAR AYVPLLEMIN 
ERFARQFRLS LFNLLRRATE VTVGGVQVLK FSEYLHTLFM PTSLNLVQID PLRGTGLFVF
DPKLVFMLVE QYFGGSGQFY NRLENREFTP TEVHIIQLVL ERTFADLKQA WEPVLAVNFE
YLQTELNPRL ATIASSSEMV VVSTFHVEFE GGGGEFHIAL PYTLLEPVRE LLATGKKDDF
AQADGGWNQA LRKNVSDAEV ELSCTLTEIQ LSLGEILALK SGDILPIELP STVTALADGI
PVFRVRYGIH HGSRALKVVE RLLSPESFTE KSSAEL