Gene Noc_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2163 
Symbol 
ID3704837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2497658 
End bp2498149 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID637738639 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_344153 
Protein GI77165628 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT CCCCTTATAC TTTTACCACC GTTATTTTCT TGCTACTGAT GTTTTCCGGT 
CAGGTCGCTC TAGCAGCGGG AAGTCCTGCT CAAACCCGGC CGATCCAGGA AGAGGAGGTT
CCCGGAGGGT TTGTTCAAGC CCCAAATATT CCTGCTTCAA CGATTGCTAC AGGAGAAGTG
CTCCAAATGA TGATAGCCCT TGTTTTGGTA CTTGGCGCTA TTGCTTTGGT CATGTGGCTG
CTGCGCCGAG TTCAGGGTTT ACAACGTAAC AATGGAACTG GCTTGCAGAT CCTGGGAGGC
GTGTCTCTTG GAACGCGGGA GCGGGCGGTG CTTGTCCAGG TAGGAGAGCA ACAACTGCTT
GTGGGGGTTT GTCCAGGGCA GATCCGGACC TTGCATGTGC TAGAGACGCC GGTTGCCATC
CCCCAGAAGC CGTTAAAAAA CCCTTTTGCT CAACATTTGA ATGCTGTACT CAAACAGGGG
GAGTCGCCAT GA
 
Protein sequence
MNKSPYTFTT VIFLLLMFSG QVALAAGSPA QTRPIQEEEV PGGFVQAPNI PASTIATGEV 
LQMMIALVLV LGAIALVMWL LRRVQGLQRN NGTGLQILGG VSLGTRERAV LVQVGEQQLL
VGVCPGQIRT LHVLETPVAI PQKPLKNPFA QHLNAVLKQG ESP