| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2136 |
|---|
| Symbol | |
|---|
| ID | 3705328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2462194 |
|---|
| End bp | 2464104 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637738612 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_344126 |
|---|
| Protein GI | 77165601 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3011] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.810683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAA AAGTATTCAG TCTCGTCAAA ATTGGACTTG AAAAACAGGT GCCGGCGTTA
GGGCTTGGCG TTTTTCGTAT TTTCTTGGGT TTAGTTATTC TTCAAGAAAT TGTTTTTCTC
TATTATTTCC GCCATCTTAT TTTTGATACT ATTCCTTTTA TTGATGTCGC TTCGCCTTCC
ATTTATTTTT TCTTGATTTT ATGGGGCATT AATACCCTTT TTTTAACTAC GGGTTACCAT
ACGCGTCTCG CCGCTATTGT CAATTATTTT TTTTGGGTCA TCTTTACCGC CTTTACCCCT
ATGTGGCGAG ATTTTGATGG GGGTTTTGAT CAGTTTATGA TCGGATCGAG TTTTCTTCTT
ATTTTCTTGC CCACGGAAAG AGCATTCTCC TTAGACAATC TTAGAGTAAG ACTTAAATTT
CTGAAATCGG AATTGCACCA CGATCCTGTT AGTACCGTTT CTGTTCTTAG CTATTATCTT
CCTCTCGCTA TCTCTTTAGG ACTCATTTAC TTTGATTCGG CTGTTCATAA ATTATTTGCG
GAGCATTGGC GTAATGGATT AGGCGCATGG TTACCTTTGA CGATGCCTTA TTATATTTCC
GCGATCGATA TGACGTGGTT CCTGAATCAA GAATTCCTGC AAAAATTTAT TGGTTATTTG
ATTATAGTTT TTGAATTTAT TTTTATTTTT ACTTTTTATC TCCGGTCTTT TCGCGTGCCT
TTGATGATTA CGGGGATCTC TCTCCATAGC GGTATTATTT TATCCCTTAA TATTTATCCT
TTTGGCTTCG GAATGCTGGT TTATTACTTT TTGATGGTCC CTTTTTCATG GTGGCAGGGC
TTAAAGAAAA CATTACAGTT TAAGTCGCCA CAATTGGTTG TTTTCTATGA TCAACAATGC
CCGCTTTGCA ATCGCACCAG AATTATTATA GAGCATTTTG ATATTTTTAA AGCTATCAAT
TTTGAAGGAC TGCAAAAGCG TGCAAAAAAA TATCCTGAAC TGAATAACAT TTCTGAAGAA
CAATTGCTAA AAGACATTTA TGCTCTCGAT CAAAAAGGAC ATCTGTACGT AGGTATAGAC
GCCTACCTGC AAATTTTATT GAAAATGAAA TATCCTGCTC TTGCAGGAAT TTTTATAAGA
ATTCCAGGGG TTTATCATTT TGGGAAAAAA ATATATCGGC GAATTGCTGA TCAGCGTGCT
CGTCTTACCT GCGATGAGAG CTGCTTTGTT TCTTCAGAAA ATTCCCTACA GGAGGCATAT
AGCTTCAAAA GAAGCTACGA ATATTATGCT GGAACAAAAA AACAACGCTC TAATCGGATT
ACCAAGTTTT TAGTATTGAT CATGCTTTTG CAGTTAAATA GTACGATTCA CTATGGGATA
TTTTATCGCC TCAACGAGGA TGGAGCAGAA AGCGAGATCG GCCAGATTTT ATCGCCGATA
AGCAATGCAG TATTGTTTCT ATCTCATGCC TTTCTAGGAA TAACACCCCA TGCGCTTTAT
ATGCATGATC ATTTTCATGG TTATAACCAC ATTTTGGCGC TCACCTACAA AAACAGCCAG
GGACAGGAGC AATGGCTTCC ATTTGTGAAC GAGGAAGGAA GGTTAGTTGC GCCAAACTGG
GGAAGAGTTC AGTCTATGTG GGCAAATGTG GCAGTGACTC CCCATATAGA GCAAAGGCGT
CTTTATAAAT TTATTAAAAA AATGACTGCT TTTTGGGGTA AGAAGATAGA TCTGGATTTA
CAAGATACTG AATTTATCAT AAAAATGAAG AGAATAGATG TTCCTGTGCA TTGGGAAAGG
AATCTGCGTA ATAAGAATAT AAATCGGCCA TGGGTAAATA TTGGGAGAGT AATTTGGCAC
AAAGGCTTGG CAAGAATAGA GATACAGGAT ATTAATCTTG AGTCATTATA G
|
|---|
| Protein sequence | MYQKVFSLVK IGLEKQVPAL GLGVFRIFLG LVILQEIVFL YYFRHLIFDT IPFIDVASPS
IYFFLILWGI NTLFLTTGYH TRLAAIVNYF FWVIFTAFTP MWRDFDGGFD QFMIGSSFLL
IFLPTERAFS LDNLRVRLKF LKSELHHDPV STVSVLSYYL PLAISLGLIY FDSAVHKLFA
EHWRNGLGAW LPLTMPYYIS AIDMTWFLNQ EFLQKFIGYL IIVFEFIFIF TFYLRSFRVP
LMITGISLHS GIILSLNIYP FGFGMLVYYF LMVPFSWWQG LKKTLQFKSP QLVVFYDQQC
PLCNRTRIII EHFDIFKAIN FEGLQKRAKK YPELNNISEE QLLKDIYALD QKGHLYVGID
AYLQILLKMK YPALAGIFIR IPGVYHFGKK IYRRIADQRA RLTCDESCFV SSENSLQEAY
SFKRSYEYYA GTKKQRSNRI TKFLVLIMLL QLNSTIHYGI FYRLNEDGAE SEIGQILSPI
SNAVLFLSHA FLGITPHALY MHDHFHGYNH ILALTYKNSQ GQEQWLPFVN EEGRLVAPNW
GRVQSMWANV AVTPHIEQRR LYKFIKKMTA FWGKKIDLDL QDTEFIIKMK RIDVPVHWER
NLRNKNINRP WVNIGRVIWH KGLARIEIQD INLESL
|
|---|
| |