| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2130 |
|---|
| Symbol | |
|---|
| ID | 3704934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2454337 |
|---|
| End bp | 2456991 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637738606 |
|---|
| Product | cation transporting ATPase, E1-E2 type |
|---|
| Protein accession | YP_344120 |
|---|
| Protein GI | 77165595 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG ATGCTTTAGA AGGGCAATGC TGGCATACCC GAGACTCAGA GGAAGTTTTG
CAGCGATTAG GCACTCATCC AGAGCGGGGA TTGGCCTTGG AAACGGTCAG GGAAAGGCTG
GTAGCTCACG GCAAAAACGC TATCCAAGAA GCTGCTCGGC GTTCTGTATG GCGCATGATT
TTAGGTCAGT TCAGAGACTT TATGGTTATC GTCCTGATCG TGGCAGCGGT CGTTTCGGGT
ATTGTCGGTG AACCTCGGGA TGCCATTGCA ATTGTAGTGA TTGTGGTACT GAATGCTATC
GTTGGCGCTA TTCAGGAATA TCGCGCGGAA CGAGCAGTTG CTGCTCTGAG AAGGATGGCG
GCGCCTGATG CCCAAGTGTG CCGAAATGGG GAAATTCAAA CCATACCGGC TACTGAGTTA
GCGCCGGGCG ATATTGTGTT GCTAGAAGCG GGTAATGTGG TCCCGGCGGA TCTTCGCCTT
TTGAAAACAT CGAATCTCAG AATCGATGAG GCGGCGCTTA CGGGCGAGTC TCAAGCCATT
CAGAAAATCC CCGAAGCTCT GAGCGAAAAT GAAGCCCCCT TGGGGGACCG TTTTAATATG
GCTTATAAGG GAACGTTCGT CAGCCATGGA CGCGCTACAG GTGTAGTGGT GGCGACCGGT
ATGGAGACTG AGTTGGGTCA GATCGCCACC CTGTTACAGC AAGAGGAAGC CGTTAAAACG
CCTCTCCAGC AACGTTTGGC TCACTTTGGG CAGAGGCTAG CTGTTGGCGT GCTTATGGTT
TGCGGGATCA TTTTTGTCAC TGGCCTGCTG CGGGGCGAAG AAGGGGTCTT GATGTTTCTA
ACTGCAGTGA GCCTAGCGGT GGCGGCCATC CCGGAAGCTT TACCTGCGGT TGTCACTGTG
TCTCTGGCTA TGGGGGCCCG TAAGATGAGT CGGCGTAATG CTTTAATTCG TCGTTTGCCC
GCCGTGGAAA CGCTTGGTTC GGTGACCTAT ATTTGCACTG ATAAGACCGG CACGCTTACT
GAAAACAGGA TGACTGCAGA GGGTTTTTGG GTAGCTGGCG AGTATCAAAG TGAAATTCCA
CCGATGGCTT CCGAATCTCC TCCTTGGAAT CGGCTAGGCC AAGCCTTGGC TCTCTGTAAT
GAGGTAGTGT CTGATAAAGA GCAGGGCGTA CGAGGAGATC CCACGGAGGT CGCCCTTTAT
CAGGCAGCCC ATAGGGCGGG TTATAAGCGG CAGTCCCTGG AAAAGAAATT ACCCCGTATA
GGCGATATCC CTTTTGATTC CGAACGTAAG CGGATGATGA CTGTGCACCG AGTCTCAGAG
CGCGAAGCGA TTGCCTTTAT CAAGGGAGCG CCAGAGAAAA TCTTGTCCCG TTGCTCCCGG
ATGCAAATGG CTGATGAGAT TACCGTAGTA GATAGAGGAA CTCTGCTTAG GGAAGCAGAA
CGCCTTGCGG AGCAAGGATA TCGAGTGCTT GCCATGGCAT ACCGGTTCCT TGAAAACATC
CCGACGGAAT GGGCACCTGA AATCCTGGAA AAGGATCTCG TCTTTCTGGG GTTGGTGGCC
TTAATTGATC CTCCTCGTAA AGAAGCCCCT AGGGCGGTGG CTGATTGCAT CTTGGCTGGC
ATTACTCCGG TAATGATTAC GGGAGATCAT CCAGGAACTG CACGGGCTAT TGCTATTCGA
TTGGGGATTG ATAAGGAAGA TGGCTTGGTG ATCAAGGGCC AAGATTTGGC GCAAATCCCA
GCCCAAGATT TTGCCCATCA GGTGAGGCAA ATAAGAACGT ATGCGCGGGT CACCCCGGAG
CAAAAGATCC GGATTGTGAA GGCGTTGCAA GATCAAGGAG AGTTTGTAGC CATGACCGGT
GATGGCGTCA ATGATGCGCC TGCTTTAAAA AGGGCCGGAA TCGGAGTGGC CATGGGTCGG
AAGGGAACCG ATGTGGCCCG AGAGGCGGCC GATATGGTGT TGCTCGATGA CAATTTTGCC
ACCATCGTGA GTGCGGTGCG GGAGGGACGC CGTATCTTTG ATAATATCCG CAAATTTGTC
AGATATACGA TGACCAGTAA TTCAGGAGAA ATCTGGACTT TGTTCCTTGC TCCCTTTCTG
GGCTTGCCCT TGCCTTTGGT GCCCATCCAA ATTCTTTGGA TCAACTTGGT GACGGATGGT
CTGCCCGGCC TGGCCCTTTC CGCAGAACCT CAGGAACGGG GAATTATGCG GCGTCCTCCC
CGTCCCCCCA ATGAAAGTAT TTTCGCCCAT GGCATGTGGC AGCATATGCT TTGGGTGGGT
CTGCTGATTG GCGGATTATC TCTCTTGGCC CAAGCTTGGG CTTATCATAG TGGCACCGCC
CACTGGCAAA CCATGGTTTT TACTGTCTTG ACTTTCTGTC AATTGGCTCA TGTGCTGGCT
ATTCGTTCGG AGAAAGAATC CCTCTTTACC CAGGGCCTTT TGAGTAACCC ATGGCTGCTT
GGGGCCGTGG CAATTACGGT AGCTTTACAG TTAGCCGTGA TTTACCTGCC ATTTCTGAAT
CCTATTTTTA GAACGGCTCC CTTATCCATG GGGGAATTGG CGCTTTGTTT TGTCTTGCCT
GTGGTAGTGT TTGTTGCCGT GGAAGTTGAG AAATGGCTGG TTAGGAAAGG CTGGATTTAT
GTTAATTATG CCTAG
|
|---|
| Protein sequence | MNNDALEGQC WHTRDSEEVL QRLGTHPERG LALETVRERL VAHGKNAIQE AARRSVWRMI
LGQFRDFMVI VLIVAAVVSG IVGEPRDAIA IVVIVVLNAI VGAIQEYRAE RAVAALRRMA
APDAQVCRNG EIQTIPATEL APGDIVLLEA GNVVPADLRL LKTSNLRIDE AALTGESQAI
QKIPEALSEN EAPLGDRFNM AYKGTFVSHG RATGVVVATG METELGQIAT LLQQEEAVKT
PLQQRLAHFG QRLAVGVLMV CGIIFVTGLL RGEEGVLMFL TAVSLAVAAI PEALPAVVTV
SLAMGARKMS RRNALIRRLP AVETLGSVTY ICTDKTGTLT ENRMTAEGFW VAGEYQSEIP
PMASESPPWN RLGQALALCN EVVSDKEQGV RGDPTEVALY QAAHRAGYKR QSLEKKLPRI
GDIPFDSERK RMMTVHRVSE REAIAFIKGA PEKILSRCSR MQMADEITVV DRGTLLREAE
RLAEQGYRVL AMAYRFLENI PTEWAPEILE KDLVFLGLVA LIDPPRKEAP RAVADCILAG
ITPVMITGDH PGTARAIAIR LGIDKEDGLV IKGQDLAQIP AQDFAHQVRQ IRTYARVTPE
QKIRIVKALQ DQGEFVAMTG DGVNDAPALK RAGIGVAMGR KGTDVAREAA DMVLLDDNFA
TIVSAVREGR RIFDNIRKFV RYTMTSNSGE IWTLFLAPFL GLPLPLVPIQ ILWINLVTDG
LPGLALSAEP QERGIMRRPP RPPNESIFAH GMWQHMLWVG LLIGGLSLLA QAWAYHSGTA
HWQTMVFTVL TFCQLAHVLA IRSEKESLFT QGLLSNPWLL GAVAITVALQ LAVIYLPFLN
PIFRTAPLSM GELALCFVLP VVVFVAVEVE KWLVRKGWIY VNYA
|
|---|
| |