Gene Noc_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2060 
Symbol 
ID3705231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2368933 
End bp2369640 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID637738535 
ProductMarR family transcriptional regulator 
Protein accessionYP_344050 
Protein GI77165525 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000547125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCAA CCGCTACCCT CTTGGAAAGT CTACCGGAAA CCCAGGGTGA GATTCTGCGT 
TACCTTAAAG CCCAAGGCAG CACCACCCTG GCTGGACTGG CGGATCGCCT GAACCTAACC
CGGGAGGCGG TCCGTCAACA CCTAGCAACG CTGCAAGAGG AAGGTTGGAT CCAGCGTGTG
GGAAGGCTTA AATCCCTTAG CCAAGGCCGT CCAGCCGCAG TGTTTGCATT GACTCCAGCC
GGCGATCACT TATTTCCGAA ATTTTACGAT TCCTTGTCCC TGGAATTCCT GGATACGCTG
GCTGACAATT TCGGCGAGGA AGCTGTGCGT ACCTTGCTTG CCGCGCTCAC TGATAAACAG
GTAGCGCGAT GGGAAACAAA ACTGCGTGGT TTGTCTCTGC CAGAGCGTAT TGAAGCCTTA
ACGGGGATTT ATTTCGAACA AGATCCCTAC ACTCATGTAG AACAAGATGA AAGGGGCTAC
CTGCTGGTGG AACGTAATTG TCCGTATCTC AACCTGGCCC TTCAACGCCC CCAGCTTTGC
AGCGTTACCC TGGCTACTTT AAGCCGGCTC CTTGGCGTGC GCGTCCGCCG GGAAGCCAAA
TTCCAGGAGG GTGATCGCCA CTGCGCTTTT CGCGTGCTTG CTGATCAGCC CCTAGAGCCC
GATTACCGTT TCAGTTTTGA AACGGAGTCG CCATTTCACC GGGACTGA
 
Protein sequence
MRPTATLLES LPETQGEILR YLKAQGSTTL AGLADRLNLT REAVRQHLAT LQEEGWIQRV 
GRLKSLSQGR PAAVFALTPA GDHLFPKFYD SLSLEFLDTL ADNFGEEAVR TLLAALTDKQ
VARWETKLRG LSLPERIEAL TGIYFEQDPY THVEQDERGY LLVERNCPYL NLALQRPQLC
SVTLATLSRL LGVRVRREAK FQEGDRHCAF RVLADQPLEP DYRFSFETES PFHRD