Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2060 |
Symbol | |
ID | 3705231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2368933 |
End bp | 2369640 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637738535 |
Product | MarR family transcriptional regulator |
Protein accession | YP_344050 |
Protein GI | 77165525 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000547125 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCAA CCGCTACCCT CTTGGAAAGT CTACCGGAAA CCCAGGGTGA GATTCTGCGT TACCTTAAAG CCCAAGGCAG CACCACCCTG GCTGGACTGG CGGATCGCCT GAACCTAACC CGGGAGGCGG TCCGTCAACA CCTAGCAACG CTGCAAGAGG AAGGTTGGAT CCAGCGTGTG GGAAGGCTTA AATCCCTTAG CCAAGGCCGT CCAGCCGCAG TGTTTGCATT GACTCCAGCC GGCGATCACT TATTTCCGAA ATTTTACGAT TCCTTGTCCC TGGAATTCCT GGATACGCTG GCTGACAATT TCGGCGAGGA AGCTGTGCGT ACCTTGCTTG CCGCGCTCAC TGATAAACAG GTAGCGCGAT GGGAAACAAA ACTGCGTGGT TTGTCTCTGC CAGAGCGTAT TGAAGCCTTA ACGGGGATTT ATTTCGAACA AGATCCCTAC ACTCATGTAG AACAAGATGA AAGGGGCTAC CTGCTGGTGG AACGTAATTG TCCGTATCTC AACCTGGCCC TTCAACGCCC CCAGCTTTGC AGCGTTACCC TGGCTACTTT AAGCCGGCTC CTTGGCGTGC GCGTCCGCCG GGAAGCCAAA TTCCAGGAGG GTGATCGCCA CTGCGCTTTT CGCGTGCTTG CTGATCAGCC CCTAGAGCCC GATTACCGTT TCAGTTTTGA AACGGAGTCG CCATTTCACC GGGACTGA
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Protein sequence | MRPTATLLES LPETQGEILR YLKAQGSTTL AGLADRLNLT REAVRQHLAT LQEEGWIQRV GRLKSLSQGR PAAVFALTPA GDHLFPKFYD SLSLEFLDTL ADNFGEEAVR TLLAALTDKQ VARWETKLRG LSLPERIEAL TGIYFEQDPY THVEQDERGY LLVERNCPYL NLALQRPQLC SVTLATLSRL LGVRVRREAK FQEGDRHCAF RVLADQPLEP DYRFSFETES PFHRD
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