Gene Noc_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2042 
Symbol 
ID3705018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2352260 
End bp2353120 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content51% 
IMG OID637738517 
ProductOmpA/MotB 
Protein accessionYP_344032 
Protein GI77165507 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCT CTTTTTTCAG GAATGGGGTG AACAAGGGCA TATTGGTGTT AGGTTTCTTC 
TCGGTTTTTC TGGTTGCGGC ATGCGCCCCG CCTACTAAGC CGGTTGATCT GGAACGTGCC
GATGCCGCTA TTGAACAGGC TCAGGCAGAT TCCAATGTCG CACAATACGC TCCGGTTAGA
TTGGACGAAG CTAAGGAAGC CTTACAGCGG GCCCAGGTTG CTTGGGAGGA AGACGAGAGT
GTCGAAGAAG TAGAACACCT TGCCTATTTG GCGCAGCAGC GCGCTGCCAT TGCAGAAGTG
GCGGCAGCAG ACAAAGCCGC TCAGGCTGAG ATCAAGAACC TGGGCCAGGA GCGTCAGCAA
ATGCTAATGG ATGTGCATGA ACTTGAGGCG AGGCAGGCTA AAGAACAAGC CAAGATGGCA
GAAATTCGAG CGGATAAGCT GGAAAAGAGA CTTGCTGAGC TTAACGCCGA AAAAACCGAG
CGCGGATATG TGCTTACCTT GGGGGATATT TTATTTGAAG TAGATAGTGC CGAACTAACC
TCCGGTGGAA TGCAGAATCT GTTTCGCTTG GTTACTTTTT TGAAAGAATA TCCTGACCGG
GAGGTAGTCG TTGAGGGGCA TACAGATAGC ACTGGTTCGG CGGTTTATAA TATGGAACTC
TCCCAACGAC GTGCCGATTC AGTGTATCTG TTTCTCGTGA ACAATGGGAT TGCGCCGGAC
CGTATTGTGG CCCATGGTTA TGGCCAAGGT TATCCAGTGG CGCCTAATAA TACCACTGCG
GGCCGCCAGA AAAATCGTCG CGTGGAAATC GTGATACTCG GTGCTGGAAA GCAGGCTGAA
GAGTACCAAC GCCCGGGTTG A
 
Protein sequence
MKVSFFRNGV NKGILVLGFF SVFLVAACAP PTKPVDLERA DAAIEQAQAD SNVAQYAPVR 
LDEAKEALQR AQVAWEEDES VEEVEHLAYL AQQRAAIAEV AAADKAAQAE IKNLGQERQQ
MLMDVHELEA RQAKEQAKMA EIRADKLEKR LAELNAEKTE RGYVLTLGDI LFEVDSAELT
SGGMQNLFRL VTFLKEYPDR EVVVEGHTDS TGSAVYNMEL SQRRADSVYL FLVNNGIAPD
RIVAHGYGQG YPVAPNNTTA GRQKNRRVEI VILGAGKQAE EYQRPG