Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1912 |
Symbol | |
ID | 3705544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2188359 |
End bp | 2190503 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738390 |
Product | phospholipase D/transphosphatidylase |
Protein accession | YP_343906 |
Protein GI | 77165381 |
COG category | [I] Lipid transport and metabolism [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCTC TTTTTAAACC AGGCAATAAT TGCTGGCGAC TTGAGCAAGC TACTCGAGCG GCTTTTCTCA TCGATGGGGC AGCCTATTTT AAGGCCTTCC GCAGCGCTGT CGAACAAGCG GAACATTCCA TCCTCATTTT AGGGTGGGAT ATTAATAGCC AGCTTCGGTT AGTACGGAAC GAGCCGTCCG ACTCATTACC CGAGACATTA GCTGATCTTC TTAATACTGT CGTCTCTCGC CGGCGGAGAC TGCAAGCACA TGTGCTCTGC TGGGATTTTG CTATGATCTA TGCCCTGGAG CGGGAATGGC TACCCATTTA TCAGCTGAAT TGGCGCACCC ACCACCGGCT ACACTTTGAA ATGGATGATC AGCACCCTGT CGGGGCATCT CATCACCAAA AGGTGGTAGT CATCGATGAT ACCGTGGCCT TTGCTGGTGG CCTAGACTTG AGCAAATGGC GTTGGGACAC GCCAGAGCAT CGACCGGATG ACGAGCGGCG CATCGATTCG GAGGGTAATC CCTATCCCCC TTTCCATGAT GTCCAGATGG TAGTCGAAGG CCCCGCAGCG GCGGCACTAG GAGATTTGGC ACGAGAACGA TGGTACCGGG CCACTGGCCG CCGTCTCTCC CCCCCCCCAG CTTCCTCCAC TCATGGGACC CCCTGGCCAA GAAAAGTCGC GCCTAATTTA GAAAATATTT CTATTGCGAT TGCCCGTACC GAACCAAAAT TTAAGAATTA TCCCGAGATA CGAGAAGTAG AACGCCTCTA TTTGGACACC ATTGCCGCAG CCCAGCGTTT CATTTACATT GAAAATCAAT ACCTTTCCGC CTGCAAAATC AAGGAAGCGC TAGCAGCACG CCTTCAAGAA CCTAAGGGTC CAGAAGTTAT ACTGATACTC CCCCTAAAAA CTGGTGGCTG GCTAGAGCAA AATACCATGG ATATCCTGCG GTGGCGGGTG CTGGAAGCCT TGGTTAATAT CGACAAATAC GACCGCTTGC GCGTTTATTG CCCTGTTACT TCGGGGATTA ATAACCAATG CATTATGGTG CATGCTAAGG TATTAATAGT AGATGATATG CTGGTTCGGA TCGGCTCGTC TAATCTTAGT AATCGTTCCC TGGGATTGGA TACCGAATGC GATCTAGCCT TGGAAGCCGG CGATAATTAC TCTATCGCTG CAACTATTGC TGAATTTCGC AACCGTCTTC TAGGAGAACA CCTCAACGTA GAACCGCAGC AGGTAGCGCA AGCAACCATC CAGCAAGATT CCTTAATAAA AGCTATAGAG AAACTACGCG GCCCCGGCCG GACTCTAAAT GTATTTGAGG CACATACTCC ACCTAAAGGG CACGACTGGC TGCCAGATGC GAGATTTATT GATCCTGAAT GCTCCATTGA TCCAGACCAA TTTGCTAATC AAATCATCCC TCCCGAACAG CGCCAACCCG CCAGCCGTCA GCTAATTTTC AGAGCCTTAA TGCTCATTAT TCCTCTAGCA CTTGCCGCTG CCTGGCGGTG GACCCCCCTA GGAGAATGGC TCGACTTGCA AACAGCCGTT AGTATCATCA AGGAGCTTAA AGAATCGCCA GAAGCGCCCC TGCTACTACT TGGAGTCTAT CTACTGGCAA GCCTTATCGC TATTCCTCTC ACTCTGCTCA TCGTCGCTAC GGTGCTGATA TTCGGTTCCC TAACCGGTTT TGCTTACGCA CTCATAAGCG CAACCTTGAG CGCTCTCCTA ACCTACGGCG TAGGCCGCCT ATTCGGGCGC CGTACGGTAA GGCGGCTTGC GGGTAAACGT CTCAACCGGC TGAGCCGCCG TTTAGCTCAG CAAGGTACGC TCACTATGCT TGCTGTTCGC CTTATCCCCA TAGCTCCTTT CACAGTGGTT AATATGGTTG CGGGCGCTTC TCATATTCGT TTTCGAGATT TTATCATAGG CACCGTACTT GGTTTAATAC CAGGGATCCT GGGAATAGCC CTTTTTATTG ATCGCGTGGT AGCCACGATA CGCGATCCAA CACCTCTTAG CTTTGCTATC TTAGGCGTGC TATTGATGCT CCTTGGACTT AGCCTGTTAG GAGTTCGCTG GTGGCTGCGT AAACAAGATG CAACCAACAA CGATAAAACC CTGAAGACCT CCTAA
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Protein sequence | MISLFKPGNN CWRLEQATRA AFLIDGAAYF KAFRSAVEQA EHSILILGWD INSQLRLVRN EPSDSLPETL ADLLNTVVSR RRRLQAHVLC WDFAMIYALE REWLPIYQLN WRTHHRLHFE MDDQHPVGAS HHQKVVVIDD TVAFAGGLDL SKWRWDTPEH RPDDERRIDS EGNPYPPFHD VQMVVEGPAA AALGDLARER WYRATGRRLS PPPASSTHGT PWPRKVAPNL ENISIAIART EPKFKNYPEI REVERLYLDT IAAAQRFIYI ENQYLSACKI KEALAARLQE PKGPEVILIL PLKTGGWLEQ NTMDILRWRV LEALVNIDKY DRLRVYCPVT SGINNQCIMV HAKVLIVDDM LVRIGSSNLS NRSLGLDTEC DLALEAGDNY SIAATIAEFR NRLLGEHLNV EPQQVAQATI QQDSLIKAIE KLRGPGRTLN VFEAHTPPKG HDWLPDARFI DPECSIDPDQ FANQIIPPEQ RQPASRQLIF RALMLIIPLA LAAAWRWTPL GEWLDLQTAV SIIKELKESP EAPLLLLGVY LLASLIAIPL TLLIVATVLI FGSLTGFAYA LISATLSALL TYGVGRLFGR RTVRRLAGKR LNRLSRRLAQ QGTLTMLAVR LIPIAPFTVV NMVAGASHIR FRDFIIGTVL GLIPGILGIA LFIDRVVATI RDPTPLSFAI LGVLLMLLGL SLLGVRWWLR KQDATNNDKT LKTS
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