Gene Noc_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1912 
Symbol 
ID3705544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2188359 
End bp2190503 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content51% 
IMG OID637738390 
Productphospholipase D/transphosphatidylase 
Protein accessionYP_343906 
Protein GI77165381 
COG category[I] Lipid transport and metabolism
[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein
[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCTC TTTTTAAACC AGGCAATAAT TGCTGGCGAC TTGAGCAAGC TACTCGAGCG 
GCTTTTCTCA TCGATGGGGC AGCCTATTTT AAGGCCTTCC GCAGCGCTGT CGAACAAGCG
GAACATTCCA TCCTCATTTT AGGGTGGGAT ATTAATAGCC AGCTTCGGTT AGTACGGAAC
GAGCCGTCCG ACTCATTACC CGAGACATTA GCTGATCTTC TTAATACTGT CGTCTCTCGC
CGGCGGAGAC TGCAAGCACA TGTGCTCTGC TGGGATTTTG CTATGATCTA TGCCCTGGAG
CGGGAATGGC TACCCATTTA TCAGCTGAAT TGGCGCACCC ACCACCGGCT ACACTTTGAA
ATGGATGATC AGCACCCTGT CGGGGCATCT CATCACCAAA AGGTGGTAGT CATCGATGAT
ACCGTGGCCT TTGCTGGTGG CCTAGACTTG AGCAAATGGC GTTGGGACAC GCCAGAGCAT
CGACCGGATG ACGAGCGGCG CATCGATTCG GAGGGTAATC CCTATCCCCC TTTCCATGAT
GTCCAGATGG TAGTCGAAGG CCCCGCAGCG GCGGCACTAG GAGATTTGGC ACGAGAACGA
TGGTACCGGG CCACTGGCCG CCGTCTCTCC CCCCCCCCAG CTTCCTCCAC TCATGGGACC
CCCTGGCCAA GAAAAGTCGC GCCTAATTTA GAAAATATTT CTATTGCGAT TGCCCGTACC
GAACCAAAAT TTAAGAATTA TCCCGAGATA CGAGAAGTAG AACGCCTCTA TTTGGACACC
ATTGCCGCAG CCCAGCGTTT CATTTACATT GAAAATCAAT ACCTTTCCGC CTGCAAAATC
AAGGAAGCGC TAGCAGCACG CCTTCAAGAA CCTAAGGGTC CAGAAGTTAT ACTGATACTC
CCCCTAAAAA CTGGTGGCTG GCTAGAGCAA AATACCATGG ATATCCTGCG GTGGCGGGTG
CTGGAAGCCT TGGTTAATAT CGACAAATAC GACCGCTTGC GCGTTTATTG CCCTGTTACT
TCGGGGATTA ATAACCAATG CATTATGGTG CATGCTAAGG TATTAATAGT AGATGATATG
CTGGTTCGGA TCGGCTCGTC TAATCTTAGT AATCGTTCCC TGGGATTGGA TACCGAATGC
GATCTAGCCT TGGAAGCCGG CGATAATTAC TCTATCGCTG CAACTATTGC TGAATTTCGC
AACCGTCTTC TAGGAGAACA CCTCAACGTA GAACCGCAGC AGGTAGCGCA AGCAACCATC
CAGCAAGATT CCTTAATAAA AGCTATAGAG AAACTACGCG GCCCCGGCCG GACTCTAAAT
GTATTTGAGG CACATACTCC ACCTAAAGGG CACGACTGGC TGCCAGATGC GAGATTTATT
GATCCTGAAT GCTCCATTGA TCCAGACCAA TTTGCTAATC AAATCATCCC TCCCGAACAG
CGCCAACCCG CCAGCCGTCA GCTAATTTTC AGAGCCTTAA TGCTCATTAT TCCTCTAGCA
CTTGCCGCTG CCTGGCGGTG GACCCCCCTA GGAGAATGGC TCGACTTGCA AACAGCCGTT
AGTATCATCA AGGAGCTTAA AGAATCGCCA GAAGCGCCCC TGCTACTACT TGGAGTCTAT
CTACTGGCAA GCCTTATCGC TATTCCTCTC ACTCTGCTCA TCGTCGCTAC GGTGCTGATA
TTCGGTTCCC TAACCGGTTT TGCTTACGCA CTCATAAGCG CAACCTTGAG CGCTCTCCTA
ACCTACGGCG TAGGCCGCCT ATTCGGGCGC CGTACGGTAA GGCGGCTTGC GGGTAAACGT
CTCAACCGGC TGAGCCGCCG TTTAGCTCAG CAAGGTACGC TCACTATGCT TGCTGTTCGC
CTTATCCCCA TAGCTCCTTT CACAGTGGTT AATATGGTTG CGGGCGCTTC TCATATTCGT
TTTCGAGATT TTATCATAGG CACCGTACTT GGTTTAATAC CAGGGATCCT GGGAATAGCC
CTTTTTATTG ATCGCGTGGT AGCCACGATA CGCGATCCAA CACCTCTTAG CTTTGCTATC
TTAGGCGTGC TATTGATGCT CCTTGGACTT AGCCTGTTAG GAGTTCGCTG GTGGCTGCGT
AAACAAGATG CAACCAACAA CGATAAAACC CTGAAGACCT CCTAA
 
Protein sequence
MISLFKPGNN CWRLEQATRA AFLIDGAAYF KAFRSAVEQA EHSILILGWD INSQLRLVRN 
EPSDSLPETL ADLLNTVVSR RRRLQAHVLC WDFAMIYALE REWLPIYQLN WRTHHRLHFE
MDDQHPVGAS HHQKVVVIDD TVAFAGGLDL SKWRWDTPEH RPDDERRIDS EGNPYPPFHD
VQMVVEGPAA AALGDLARER WYRATGRRLS PPPASSTHGT PWPRKVAPNL ENISIAIART
EPKFKNYPEI REVERLYLDT IAAAQRFIYI ENQYLSACKI KEALAARLQE PKGPEVILIL
PLKTGGWLEQ NTMDILRWRV LEALVNIDKY DRLRVYCPVT SGINNQCIMV HAKVLIVDDM
LVRIGSSNLS NRSLGLDTEC DLALEAGDNY SIAATIAEFR NRLLGEHLNV EPQQVAQATI
QQDSLIKAIE KLRGPGRTLN VFEAHTPPKG HDWLPDARFI DPECSIDPDQ FANQIIPPEQ
RQPASRQLIF RALMLIIPLA LAAAWRWTPL GEWLDLQTAV SIIKELKESP EAPLLLLGVY
LLASLIAIPL TLLIVATVLI FGSLTGFAYA LISATLSALL TYGVGRLFGR RTVRRLAGKR
LNRLSRRLAQ QGTLTMLAVR LIPIAPFTVV NMVAGASHIR FRDFIIGTVL GLIPGILGIA
LFIDRVVATI RDPTPLSFAI LGVLLMLLGL SLLGVRWWLR KQDATNNDKT LKTS