| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1879 |
|---|
| Symbol | |
|---|
| ID | 3705453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2137197 |
|---|
| End bp | 2139560 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637738358 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_343875 |
|---|
| Protein GI | 77165350 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTTT GGAAACGCAG GCAAAAACAA CGGCGCGATG AGCCAATCCA ACCACTGGAT
GAGGAATCCT TTGTCGAGCC CGAGGAAGAA TTAGCAGAAG CTTCGCTAGA GGAAACAGAG
GAGGTCGGAG CATTCTCTAA GCGAGCAGAG GCTATGCCAG AAGAATCATG GAAGGAAGAA
GGGATAGAAA CAACCCCGGA TGATCCGTAC CTTCGCGACT TATTACCCGC ATTAAAGCGG
TTGGATCGCC TGCTTGAACA GGCAATCGCT GTGGCCCAGA CGGTTTATGG ACCTAAAGCC
GCTGCTAATC CTTTCCGGGG CCTTCATATC AGCAAAAGTG AAGCAGAACA GTTGCTAACG
CGTGAGCCTG GAAGACCTGT TTTTCATTTC CCTGACAAAC AATTGGAAGA AACTTTGTCG
GATGAGGCAC TAGGTGAAGG TTCGCGGCTA GCCTGGCTGC AGCAGGTTTT CAATCTGTCT
TCCTTTGAGC TTGATGTACT TCTTCTGGCG CTTGCGCCTG AGATCGATCT GCGCTATGAG
CGGTTATATG CCTACCTTCA GGATGATGTG ACCCGCCGGC GGCCTAGCAT CGATTTGGTA
CTTAATTTAT TGAGTTTAAC GACAGCAGAG AAGCTTAAAA ACCGTATCTA CTTTGCACCA
GAAGCCCCCC TCATTCAGCA CAACCTGGTT CAGCTAATTC CCGATTCGCA GCAGACTTCA
CCCTCCCTGT TGAGCCATTA TCTCAAGATC GATGAGCAGA TTATCCGCTT ACTACTGGGG
CAAGAGAATC TCGATTCACG GTTGGCGCCA TGTTGCGAGA TGGTGGAGTC CAACACCTCT
TTGGATGAAG CCTTTTTCAA TACGGGAATA AAGCAAGCGC TACCTGCTTT GATTCTCCAA
GCCAGGGAAG CGCACCGACC ATTGCGGCTG TATTTCCACG GACCCCATGG CATAGGTAAG
CGTCGTATGG CGGAAGCATT GGCAGCAAAG GTCAATAGGC CTCTTCTGAT TGTGGACCTA
CTCCATGCTC TTACCGTTGA TCCCGATTTC GAGCGCGTGC TGAAAATCCT GTTCCGCGAA
GCCTGGTTTC AAAACGCCGT TTTATATCTT GAGGGGATGG ACACTTTGCT TAGGGAAGAA
CGGGCTATCC CATATCAAGC ACTGCTCGAT GCCTTGGCTC AAGATGCAGG TATCGTCATC
TTGGCGGGCA CCCAGCCCTG GGTACCTAGG GGACGAATTC CTACGGGCGT GATCGAGGTA
TCCTTCCCCA TACCGGACTT TGCTGAGCGC CGATCCTGCT GGCAGGCTAA TTTGGCAGCG
GAAGATAGGG CACTCAGCTC AAGGGATTTG GATAGCCTTG CTAACCGGTT CCGCTTAACC
CCCAACCAGA TTGCCGAGGC AGCCGTCACT GCATGCAACC AGGCACTTCT GCGGAGCATT
ACCCAGGCAC CGGAGGAGTT ACCCTCTCAA TCCAGAATTC AACCCACGCT CAGTGACCTG
TTTGCCGCAG CCCGCACTCA ATCCGGTCAC GAGTTAGCGA CATTGGCCAA GAAAATACAG
CCCAAGTACA CCTGGAACGA TATTGTTTTG CCTGACGATA GCATGGCCCA ATTGCGGGAG
ATATGCCAGT GGGTTCACCA TCATCACCAG GTGTTAGGCG AATGGGGGTT TGATCGCAAG
CTCTCTCTGG GCAAAGGCGT TAATGCTTTG TTCTCCGGGC CTTCCGGTAC CGGCAAGACC
ATGGCCGCAG AGATCATGGC CAATAAGTTA GCACTCGATC TTTATAAGAT TAACCTTTCC
ACCGTAATCA GCAAGTATAT TGGCGAAACG GAAAAGAATT TGGAGCGTAT TTTCACTGCG
GCTGAGAATG CCAATGCCAT TCTCTTTTTT GATGAGGCTG ATGCCCTCTT CGGCAAGCGC
TCTGAAGTGC GCGATTCCCA TGATCGTTAT GCCAATGTGG AAATTTCCTA TCTGCTACAA
AAGATGGAAA CCTACGAAGG CATTGCCATT CTGGCGACCA ATCTGCGCCA GAATTTGGAC
GAGGCTTTCG TGCGTAGGTT GGCTTTTACA GTCCATTTTC CTGTTCCCGA TGAAGCCAGC
CGCAGGCGGA TTTGGGCTGG AATTTGGCCA ATAGAAACAC CCTTGGCCAA AGAAGTAGAT
TTCGATTTTT TGGCTCAACA ATTCAAACTG AACGGCGGCA ATATCAAGAA CATTGCCCTC
GCTGCTGCCT TTCTTGCGGC GGAAAAGAAG GGTCCGGTGA CCATGGCCCA TGTACTTCAG
GCGGTGCGCC GGGAGTATCA AAAACTGGGC AAACCGCTTT CGGCGACTGA ACTGGGAATC
GTCGCGCGAG AGGCGTCAGC ATGA
|
|---|
| Protein sequence | MGFWKRRQKQ RRDEPIQPLD EESFVEPEEE LAEASLEETE EVGAFSKRAE AMPEESWKEE
GIETTPDDPY LRDLLPALKR LDRLLEQAIA VAQTVYGPKA AANPFRGLHI SKSEAEQLLT
REPGRPVFHF PDKQLEETLS DEALGEGSRL AWLQQVFNLS SFELDVLLLA LAPEIDLRYE
RLYAYLQDDV TRRRPSIDLV LNLLSLTTAE KLKNRIYFAP EAPLIQHNLV QLIPDSQQTS
PSLLSHYLKI DEQIIRLLLG QENLDSRLAP CCEMVESNTS LDEAFFNTGI KQALPALILQ
AREAHRPLRL YFHGPHGIGK RRMAEALAAK VNRPLLIVDL LHALTVDPDF ERVLKILFRE
AWFQNAVLYL EGMDTLLREE RAIPYQALLD ALAQDAGIVI LAGTQPWVPR GRIPTGVIEV
SFPIPDFAER RSCWQANLAA EDRALSSRDL DSLANRFRLT PNQIAEAAVT ACNQALLRSI
TQAPEELPSQ SRIQPTLSDL FAAARTQSGH ELATLAKKIQ PKYTWNDIVL PDDSMAQLRE
ICQWVHHHHQ VLGEWGFDRK LSLGKGVNAL FSGPSGTGKT MAAEIMANKL ALDLYKINLS
TVISKYIGET EKNLERIFTA AENANAILFF DEADALFGKR SEVRDSHDRY ANVEISYLLQ
KMETYEGIAI LATNLRQNLD EAFVRRLAFT VHFPVPDEAS RRRIWAGIWP IETPLAKEVD
FDFLAQQFKL NGGNIKNIAL AAAFLAAEKK GPVTMAHVLQ AVRREYQKLG KPLSATELGI
VAREASA
|
|---|
| |